Pairwise Alignments

Query, 598 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Azospirillum sp. SherDot2

Subject, 603 a.a., acyl-CoA dehydrogenase from Caulobacter crescentus NA1000 Δfur

 Score =  566 bits (1459), Expect = e-166
 Identities = 321/578 (55%), Positives = 383/578 (66%), Gaps = 17/578 (2%)

Query: 1   MTYTAPVDDLRFVLNEVVGLDAIA-ALPHCDSAAPDLVDAILEEAGKFASGVLAPLNRVG 59
           MT+ APV DL F L  V G + +A A P  D+   D V A+LE AG FAS +LAPLNR G
Sbjct: 19  MTFRAPVRDLAFSLRHVAGFERLADAFPEADA---DTVAAVLEAAGAFASDILAPLNRQG 75

Query: 60  DKEGAKLENGVVRTATGWKEAYGQFTEAGWNSLPFEPEYGGQGLPWTVAFAVNEMWQAAN 119
           D  GA+LENGVVRTA G+ +AY QF + GW SL    E+GGQGLP T+  AV EM QAAN
Sbjct: 76  DLVGARLENGVVRTAPGFADAYQQFAQGGWTSLAAPAEHGGQGLPKTLEVAVLEMVQAAN 135

Query: 120 LSFGLCPLLTQGAVDLLTEHASDEQKAVYLSKMISGEWTGTMNLTEPQAGSDLAAVRTKA 179
           ++FGLCP+L+ GA++ L    S EQKA YL K++SGEWTGTMNLTEPQAGSDLAA+ T A
Sbjct: 136 MAFGLCPMLSLGAIEALELCGSPEQKAKYLGKLVSGEWTGTMNLTEPQAGSDLAALTTMA 195

Query: 180 VRAGDGSYRITGQKIFITYGEHDLTENIVHLVLARLPDAPAGIKGISLFIVPKFLPNADG 239
              GDG +RITGQKI+IT+G+HD  +NIVHLVLAR PDAP G+KGISLF+ PK L   DG
Sbjct: 196 TPDGDGGWRITGQKIYITWGDHDAADNIVHLVLARTPDAPPGVKGISLFLAPKVLVGDDG 255

Query: 240 TPGQRNDLRCASLEHKLGIMASPTAVMAYGDDEGAIGYLVGEENRGIEYMFTMMNNARLG 299
             G  N LR  SLEHKLGI  SPT VM +   EGA   LVG   +G+  MF MMN ARL 
Sbjct: 256 KLGPANALRAGSLEHKLGIHGSPTCVMLF---EGAKAELVGGLGQGLPNMFVMMNAARLQ 312

Query: 300 VGIQGVAIAERAYQQGRAYARSRVQSKDLADPRGSGVAIIKHPDVRRMLLDMRAKTEAAR 359
           VG QGVAIAERAYQQ  A+++ R Q +  A        +  HPDVRR L+ M+A  EAAR
Sbjct: 313 VGTQGVAIAERAYQQALAFSQDRAQGRS-AWTGAYPSRLFDHPDVRRTLVLMKAHIEAAR 371

Query: 360 ALALYAGTQLDISRHHEDPAVRAAATARVDVLTPIVKAWSTDIGCEVASTGVQIHGGMGF 419
            + L      D++R   D A R AA  R ++LTPI KAWSTDIG  VAS GVQIHGGMGF
Sbjct: 372 GICLSTAVAADLARAAPDAATRTAAKLREELLTPIAKAWSTDIGVWVASQGVQIHGGMGF 431

Query: 420 IEETGAAQHYRDARITPIYEGTNGIHGNDLTFRKTGRDKGAAARAFVADMRATVEELGAA 479
           IEETGAAQHYRDARI PIYEGTNGI   DL  RK    +G A    + D+R T++ L A+
Sbjct: 432 IEETGAAQHYRDARIAPIYEGTNGIQAIDLVGRKLMLGEGQAVGDLMDDIRDTIDLLKAS 491

Query: 480 PGDDLAVIRTELSAGLDALDRAIDWMVATQAEGDLQGAAAGAVAYLKLWGTVAGGWMLAR 539
              DL  +   L A LDA   A  W++  +A+  +  A AGA AY  L G V GGWMLA+
Sbjct: 492 ---DLKSVGLRLEAALDAAASATAWLIERRAKA-MPDALAGATAYQTLLGDVVGGWMLAK 547

Query: 540 SAMKAMAGLRQPGANASFLESKLIVARFYAEQVLATAP 577
            A+ A        A+A++ ESK  +AR +AE VLA  P
Sbjct: 548 GALAA-----DGEADAAWAESKRALARVFAEAVLAQVP 580