Pairwise Alignments

Query, 498 a.a., Cytochrome c oxidase subunit 1, bacteroid from Azospirillum sp. SherDot2

Subject, 548 a.a., cytochrome cbb3 oxidase subunit I ccoN from Caulobacter crescentus NA1000 Δfur

 Score =  672 bits (1733), Expect = 0.0
 Identities = 310/472 (65%), Positives = 376/472 (79%), Gaps = 4/472 (0%)

Query: 6   LTSGATLGSQRVSEDVRYHEDAIRLFVIAAVFWGVVGFLAGTFIALQLAFPALNL--GLE 63
           L +G   G+ +   D  Y ++ ++  VIA +FWG  G L G  IA QL++P +     L 
Sbjct: 59  LNAGLAGGTLQDHPD-EYSDNVVKAGVIATMFWGAAGLLVGVIIAAQLSWPTIFYFPDLG 117

Query: 64  WTSFGRLRPVHTSAVIFAFGGNVLFATSLYSVQRTCRQYLFGGEGLAKFIFWNYNVFIVL 123
           + +FGRLRP+HTSAVIFAFGGN L ATS Y VQRTC+  L GG     F+FW Y +FIVL
Sbjct: 118 FLNFGRLRPLHTSAVIFAFGGNALIATSFYVVQRTCKARLAGGI-TPWFVFWGYQLFIVL 176

Query: 124 AALSYVLGFTQGKEYAEPEWILDLYLTVTWVLYAVQFIGTVMTRRESHIYVANWFFMAFI 183
           AA  Y++G T GKEY+EPEW  DL+LT+ WV Y + F+GT+  R+E HIYVANWF++AFI
Sbjct: 177 AATGYLMGATSGKEYSEPEWYTDLWLTIVWVAYLLVFLGTIWKRKEPHIYVANWFYLAFI 236

Query: 184 LTVAILHIGNNINIPVSLFGMKSYTFVSGVQSAMVQWWYGHNAVGFFLTAGFLGIMYYFV 243
           +TVA+LH+ NN  +PV L   KSY   +GVQ A+VQWWYGHNAVGFFLTAGFL +MYYFV
Sbjct: 237 VTVALLHVVNNAAVPVGLLNHKSYGVFAGVQDALVQWWYGHNAVGFFLTAGFLAMMYYFV 296

Query: 244 PKRAERPVYSYRLSIVHFWTLIFLYIWAGPHHLHYTSLPDWAQTLGMTFSVMLWMPSWGG 303
           P+R ERPVYSYRLSIVHFW LIF+YIWAGPHHLHYT+LP WAQTLGMTFS+MLWMPSWGG
Sbjct: 297 PRRVERPVYSYRLSIVHFWALIFIYIWAGPHHLHYTALPQWAQTLGMTFSIMLWMPSWGG 356

Query: 304 MINGIMTLSGAWDKLRTDPVLRFLVTSVAFYGMSTFEGPLMSVKPVNALSHYTDWTIGHV 363
           MING+MTLSGAWDKLRTDPV+R +V S+AFYGMSTFEGP+MS++ VNALSHYTDWTIGHV
Sbjct: 357 MINGLMTLSGAWDKLRTDPVVRMMVVSIAFYGMSTFEGPVMSIRAVNALSHYTDWTIGHV 416

Query: 364 HSGALGWVAFVSFGAIYYLVPVLWKRSQLYSMRLVSYHFWTATIGIVLYITAMWVSGIMQ 423
           HSGALGWV F+SFGAIY LVP LWK+  +YS +L+ +HFW AT GI+LYI AMWVSG+M+
Sbjct: 417 HSGALGWVGFISFGAIYCLVPWLWKKPGMYSNKLIEWHFWIATTGILLYIAAMWVSGVME 476

Query: 424 GLMWRAYDNLGFLQYSFVETVAAMHPFYVIRAMGGVLFVTGALIMVYNLWRT 475
           GLMWR Y   GFL YSF+ETV+A H   VIR +GG+++++GALIM+ N+W+T
Sbjct: 477 GLMWREYTPQGFLAYSFIETVSAKHIENVIRTVGGLMYLSGALIMIVNMWKT 528