Pairwise Alignments

Query, 551 a.a., hypothetical protein from Azospirillum sp. SherDot2

Subject, 662 a.a., phage terminase large subunit family protein from Magnetospirillum magneticum AMB-1

 Score =  175 bits (444), Expect = 4e-48
 Identities = 164/545 (30%), Positives = 237/545 (43%), Gaps = 44/545 (8%)

Query: 1   MLRDTPVLKPLMRPTRKGEKQDNATFYQLSNGASVRVVGAASDDAFRRYSARFLFADEID 60
           ++ ++P ++  ++P R  +  +         G  V + GA S    R   AR+LF DE+D
Sbjct: 139 LIDESPAIRERVKPARARDAGNTMLSKDFPGGTLV-LTGANSAVGLRSMPARYLFLDEVD 197

Query: 61  GDGWTPGAKTQGDKLKLFWTRGETFWNRKQV-RGSTPLLYETSRVWKLWLASDQRRYFVP 119
              +   A  +GD + L   R  TF +R++    STP +   SR+ + + ASDQRR+FVP
Sbjct: 198 A--YPASADEEGDPVGLAEARSLTFAHRRKAFLASTPTIRGLSRIEREYEASDQRRFFVP 255

Query: 120 CPQCSDAAGQLDGWQYLDWGGPDVPHGLKWSLDAEGTLDKVWYVGTCGCIVEERHKAWMD 179
           CP C          Q+L +        LKW     G++  V    +C   + E HK  M 
Sbjct: 256 CPHCG-------AMQWLKF------ERLKWDRGQPGSVRYV--CESCDHDIAEHHKGGML 300

Query: 180 ANGEWRPTARAKVPGHVGMHLWTGMSLNPNAAWTVIVQEWLEAQADPASLVQPFMNLRLG 239
           A GEWR TA A  PG VG H+    S     +W  I + W  AQ +  +L + F N  LG
Sbjct: 301 AAGEWRATAIASDPGTVGFHISALYSPPGWQSWRDIARLWEAAQGNDDAL-RVFKNTVLG 359

Query: 240 RPYRAIYGQEVKSSSFIDRMEPYP-AEVPAGVEFITVGVDVQSGKVNPRLEASVYGWGRG 298
             +    G+        DR + +    VPAG  F+T G DVQ  +V    E  V+ WGRG
Sbjct: 360 ETW-VESGEAPDWQRLYDRRKTWTNGIVPAGGLFLTAGADVQKDRV----EIDVWAWGRG 414

Query: 299 LEVWLIGHFVLAGDPAKGEVWAALDEGVLLRRFRKPDGTTLDVRATCIDSGGHHTQEVYA 358
           LE WLI H V+ G P K E W AL++ VL + +    G  L +    IDS G+ T  VY+
Sbjct: 415 LESWLIDHIVIDGGPEKAETWEALEQ-VLAKIWPHASGIGLKIARLAIDS-GYETSAVYS 472

Query: 359 FANKRRSRRVWAIKG-----RSESRGQRAKVWPRKPSSKL--GHVWYMIGGNAARDWAYG 411
           +  K    +V  IKG     RS        V   +   K+  G   + +  +  +   Y 
Sbjct: 473 WGRKMGVGQVSPIKGVEGFNRSSPVSGPTYVDATEGGKKIRRGARLWTVAVSTFKAETYR 532

Query: 412 SLAVDKIGPRH----VHFPQAAIDGARELDDEFFAQLTREKLIV---PRGQQYTVWVKPS 464
            L +++         V +P   +      D E+  Q   E+L+     RG     W K  
Sbjct: 533 FLRLERPTDEELAEGVRYPAGTVHLPSWADSEWCKQFVAEQLVTVKNRRGFTKLEWQKLR 592

Query: 465 EAHEAGVCFVYAYAAVCGLQALSGKYVKLGEAEVDAAPAEASSDTDTEPTPADAIAAAVA 524
           E +EA  C VYA AA     A      K  + E   A +E +     EP           
Sbjct: 593 ERNEALDCRVYARAAAWIAGADRWPEAKWRDLEAQLAISELAQ--AEEPQAGQIRRPQTR 650

Query: 525 RARRL 529
           R+RR+
Sbjct: 651 RSRRV 655