Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 411 a.a., site-specific integrase from Rhizobium sp. OAE497

 Score =  114 bits (284), Expect = 7e-30
 Identities = 99/415 (23%), Positives = 177/415 (42%), Gaps = 37/415 (8%)

Query: 1   MASVRKREWQYNGEVKTAWVVNYTDQSGKRRLKTFDRKKEADAYRLKVETEIEKGEHTAD 60
           MA++ KR W        AWV+ +TD +GKR  + FD+K++A+A+R +V  ++  G   AD
Sbjct: 1   MATITKRRWSNKSGEHEAWVLAWTDATGKRHKRQFDKKRDAEAHRTEVTHQVAVGTFRAD 60

Query: 61  GSSATVARVCDQFIKSAEERYKAGSIGTSTFYK-YRLAVDRYIIPAIGSRRFNSLSWSDL 119
            SS TV      ++K   ER   G   T  + +     +  Y+ P    R         +
Sbjct: 61  ASSTTVDDAVTSYLKLLTERRDRGEHVTEHYLRTVEGQLRNYVAPTEEHRAKQPEKTRII 120

Query: 120 EALQRGFSKVSPATAE--------------GYLTTLKMIEDY------AIRRGYTKKRIV 159
                G  K+S  TA+              G +TT +++         A+          
Sbjct: 121 FDGHIGPVKLSQCTAKVVSDFRDRLRTAGVGVVTTRRILGSLSRALQNAVEADLMAVNPA 180

Query: 160 RDYRLDFASSKKKKIRIPAIEEILSILKVVDERPRNYVIRGHMLLRCFVHLAAFCGLRYG 219
            + R+     +  K  +P  +  L + + + E      +R        + L+A  G+R  
Sbjct: 181 ANIRVTGKRGEGSKKVVPPSK--LDLARTLAEAKGGLAVR--------MRLSASAGVRAS 230

Query: 220 EIAGLTKDNIDLDNRIIMVRHSLTSWDELKEPKTEAGVRNVPIPAHIVALLKEWIEKHQL 279
           E+  L   ++  +   + V   + ++      K+ AG+R VP+ + ++  L+ W    + 
Sbjct: 231 ELYFLRWKHVSFNTGELTVDGRVDAYKNADTTKSVAGIRTVPLSSAMLNDLRAWRAAAKN 290

Query: 280 INERDLVFRTSTGCPINSGNFHTHFWHPLLKRAGLYSTDGDQLH----FHALRHFTVSFM 335
               DL+F  S G  ++  N  T  + PL+K     + +  +L+    +HALRHF +S  
Sbjct: 291 KEADDLIFPNSRGGFMDHKNILTREYRPLIKAVSAKAKEEGKLYKAFNWHALRHFAISTW 350

Query: 336 LNQGIPVTEVSRHVGHSRSDITLNTYAHALANDGQRQEAMDRIADVLL-DRARVA 389
           +  G+    V    GHS   +T++ Y H   +D  R   MD+I+  +  D A++A
Sbjct: 351 IEAGLQPKTVQTFAGHSSLAVTMSRYGHLFPSDSHR-NVMDQISSSIFGDGAQMA 404