Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 289 a.a., tyrosine-type recombinase/integrase from Escherichia coli ECRC99

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 62/267 (23%), Positives = 99/267 (37%), Gaps = 41/267 (15%)

Query: 130 SPATAEGYLTTLKMIEDYAIRRGYTKKRIVRDYRLDFASSKKKKIRIPAIEEILSILKVV 189
           S  T   Y+TT+  +  +A   GYT            A  KK K++   +          
Sbjct: 19  SVVTVNYYMTTIAGMFQFATDNGYTSGNPFNG----LAPLKKSKVKPDPLTR-------- 66

Query: 190 DERPRNYVIRGHMLLRCFVHLAAFCGLRYGEIAGLTKDNIDLDNRIIMVRHSLTSWDELK 249
           DE  R      H   +    LA + G+R+GE+  L  ++IDL  R I +R + T   E  
Sbjct: 67  DEFIRFIEACRHQQTKNLWILAVYTGIRHGELVSLAWEDIDLKARTITIRRNYTKLGEFT 126

Query: 250 EPKTEAGV-RNVPIPAHIVALLKEWIEKHQL-----------------INERDLVF---- 287
            PKT+AG  R + +    +  LK   E   L                 +++   VF    
Sbjct: 127 PPKTDAGTGRTIHLVQPAIDALKSQAEMTMLGKQHSVEVKQREYGRTAVHKCTFVFSPQV 186

Query: 288 --RTSTGCPINSGNFHTHFWHPLLKRAGLYSTDGDQLHFHALRHFTVSFMLNQGIPVTEV 345
             +     P    +     W  +LKRAGL      Q      RH    + L  G   + +
Sbjct: 187 TKQQQLSGPHYKVDSIRESWTSILKRAGLRHRKSYQ-----SRHTYACWSLAAGANPSFI 241

Query: 346 SRHVGHSRSDITLNTYAHALANDGQRQ 372
           +  +GH+ + +  N Y   + ++   Q
Sbjct: 242 ASQMGHTNAQMVFNVYGAWMKDNNHEQ 268