Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 387 a.a., integrase from Escherichia coli ECRC98

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 20/169 (11%)

Query: 204 LRCFVHLAAFCGLRYGEIAGLTKDNIDLDNRIIMVRHSLTSWDELKEPKTEAGVRNVPIP 263
           L+  V  A   GLR   I  L    ID+  R+        +W   +E K+   +  V + 
Sbjct: 202 LKSVVEFALATGLRRSNIINLEWQQIDMQRRV--------AWINPEESKSNRAI-GVALN 252

Query: 264 AHIVALLKEWIEKHQ---LINERDLVFRTSTGCP-INSGNFHTHF-WHPLLKRAGLYSTD 318
                +LK+ I  H     + +        T  P +    +  +  W   L+RAG+    
Sbjct: 253 DTACRVLKKQIGNHHRWVFVYKESCTKPDGTKAPTVRKMRYDANTAWKAALRRAGI---- 308

Query: 319 GDQLHFHALRHFTVSFMLNQGIPVTEVSRHVGHSRSDITLNTYAHALAN 367
            D   FH LRH   S+++  G+P++ V + +G   S   +  YAH   N
Sbjct: 309 -DDFRFHDLRHTWASWLVQAGVPLS-VLQEMGGWESIEMVRRYAHLAPN 355