Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 426 a.a., site-specific integrase from Escherichia coli ECRC98

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 60/269 (22%), Positives = 103/269 (38%), Gaps = 46/269 (17%)

Query: 130 SPATAEGYLTTLKMIEDYAIRRGYTKKRIVRDYRLDFASSKKKKIRIPAIEEILSILKVV 189
           S  T   Y+T L  +  + +  GY     + D      S  K+   IP        ++++
Sbjct: 155 SAVTVNNYMTNLYAVFQFGVDNGY-----LADNPFKGISPLKESRTIPDPLSREEFIRLI 209

Query: 190 DERPRNYVIRGHMLLRCFVHLAAFCGLRYGEIAGLTKDNIDLDNRIIMVRHSLTSWDELK 249
           D   RN   +    L C   ++ + G+R GE+  L  ++IDL N  +++R +L   D   
Sbjct: 210 DAC-RNQQAKN---LWC---VSVYTGIRPGELCALGWEDIDLKNGTMIIRRNLAK-DRFT 261

Query: 250 EPKTEAGVRNV--PIPAHIVALLKEW----IEKHQLIN------------ERDLVFRTST 291
            PKT+AG   V   I   I AL  +     + K  +I+            +   VF+   
Sbjct: 262 VPKTQAGTNRVIHLIKPAIDALRSQMALTRLSKEHIIDVHLREFGRTEKQKCTFVFQPEV 321

Query: 292 GCPINSGNFHTHF--------WHPLLKRAGLYSTDGDQLHFHALRHFTVSFMLNQGIPVT 343
              +   N+  HF        W   +KRAG+      Q      RH    + L  G    
Sbjct: 322 SAKVK--NYGDHFTVDSIRQMWDAAVKRAGIRHRKSYQ-----SRHTYACWSLTAGANPA 374

Query: 344 EVSRHVGHSRSDITLNTYAHALANDGQRQ 372
            ++  +GH+ + +    Y   ++ +   Q
Sbjct: 375 FIANQMGHADAQMVFQVYGKWMSENNNAQ 403