Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 428 a.a., site-specific integrase from Escherichia coli ECOR38

 Score = 58.5 bits (140), Expect = 4e-13
 Identities = 76/342 (22%), Positives = 134/342 (39%), Gaps = 61/342 (17%)

Query: 74  IKSAEERY---KAGSIGTSTFYKYRLAVDRYIIPAIGSRRF-NSLSWSDLEALQR----G 125
           +K+  E++   K   I  +   +Y+ +V + ++P +G ++  +S++  DL  ++R    G
Sbjct: 84  VKALSEKWLDLKKIEICANALNRYQ-SVIKNMLPMLGEKKLVSSITKEDLLFVRRDLLTG 142

Query: 126 FSKVSPA-----------TAEGYLTTLKMIEDYAIRRGYTKKRIVRDYRLDFASSKKKKI 174
           + K+S             T   Y+TT+  +  +A   GYT            A  KK K+
Sbjct: 143 YQKLSNGKTSSIKGRSVVTVNYYMTTIAGMFQFATDNGYTSGNPFNG----LAPLKKSKV 198

Query: 175 RIPAIEEILSILKVVDERPRNYVIRGHMLLRCFVHLAAFCGLRYGEIAGLTKDNIDLDNR 234
           +   +          DE  R      H   +    LA + G+R+GE+  L  ++IDL  R
Sbjct: 199 KPDPLTR--------DEFIRFIEACRHQQTKNLWILAVYTGIRHGELVSLAWEDIDLKAR 250

Query: 235 IIMVRHSLTSWDELKEPKTEAGV-RNVPIPAHIVALLKEWIEKHQL-------------- 279
            I +R + T   E   PKT+AG  R + +    +  LK   E   L              
Sbjct: 251 TITIRRNYTKLGEFTPPKTDAGTGRTIHLVQPAIDALKSQAEMTMLGKQHSVEVKQREYG 310

Query: 280 ---INERDLVF------RTSTGCPINSGNFHTHFWHPLLKRAGLYSTDGDQLHFHALRHF 330
              +++   VF      +     P    +     W  +LKRAGL      Q      RH 
Sbjct: 311 RTAVHKCTFVFSPQVTKQQQLSGPHYKVDSIRESWTSILKRAGLRHRKSYQ-----SRHT 365

Query: 331 TVSFMLNQGIPVTEVSRHVGHSRSDITLNTYAHALANDGQRQ 372
              + L  G   + ++  +GH+ + +  N Y   + ++   Q
Sbjct: 366 YACWSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQ 407