Pairwise Alignments

Query, 411 a.a., Putative prophage phiRv2 integrase from Azospirillum sp. SherDot2

Subject, 372 a.a., site-specific integrase from Phocaeicola dorei CL03T12C01

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 41/175 (23%), Positives = 85/175 (48%), Gaps = 26/175 (14%)

Query: 211 AAFCGLRYGEIAGLTKDNIDLD-NRIIMVRHSLTSWDELKEPKTEAGVRNVPIPAHIVAL 269
           + +CGLR+ ++  L   +ID   NR+ +++            K ++  +N  +  ++   
Sbjct: 221 SCYCGLRWCDVHQLQYKDIDFSSNRLTILQQ-----------KVQSHSKNAILHLNLNHT 269

Query: 270 LKEWIEKHQLINERDLVFRTSTGCPINSGNFHTHFWHPLLKRAGLYSTDGDQLHFHALRH 329
             + +++H+ INE DLVF    G P  S ++     +  +KRA ++      + FH  RH
Sbjct: 270 AIKLLQRHKGINE-DLVF----GLP--SYSYTLRILNKWVKRANIHK----HITFHCARH 318

Query: 330 FTVSFMLNQGIPVTEVSRHVGHSRSDITLNTYAHALANDGQRQEAMDRIADVLLD 384
             ++ ++  G  +   +   GHS +  T   Y H +  D  +Q+A+D + D++++
Sbjct: 319 SFITNIMANGANIKTAASLAGHSTTRHT-EKYVHII--DELKQKAVDSLPDIIVN 370