Pairwise Alignments

Query, 315 a.a., Tyrosine recombinase XerC from Azospirillum sp. SherDot2

Subject, 297 a.a., site-specific tyrosine recombinase XerD from Pantoea agglomerans CFBP13505 P0401

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 79/297 (26%), Positives = 128/297 (43%), Gaps = 39/297 (13%)

Query: 18  SDLQAHLLDAFFAGRNA--RTVAAYRRDLEDWRTFAGAANMDAAARAILAVSHGQANAWA 75
           SDL    LDA +  RN    T+++YR+DL+    +     +   + A L +         
Sbjct: 4   SDLTEQFLDALWIERNLAQNTLSSYRQDLQTLTGWLAHHQLTLLSVAPLDLQQ------- 56

Query: 76  LAYKAAMIERGLQPATVNRRLAALRSLVKLGNTLGLVSWRLEVENVPSAAYRDTRGPGR- 134
             + A  +E G +  +  R L+A+R L +      L   +L  ++ PSA     + P R 
Sbjct: 57  --FLAERLEGGYKATSSARLLSAMRRLFQY-----LYREKLRPDD-PSALLSAPKLPQRL 108

Query: 135 --DGVRTLFELAAQPGGSKA---LRDVAVLRLLHDVALRRGEVVGLDLAHYDPRRGTVAI 189
             D      E   Q         LRD A+L LL+   LR  E++GL L+    R+G V +
Sbjct: 109 PKDLSEAQVERLLQAPNIDIPLELRDKAMLELLYATGLRVSELIGLTLSDISLRQGVVRV 168

Query: 190 LGKGRTERQLVTLPPAARAAVEAWI------AARGSVAGPLFTNQDRARKGSGRLTDSAV 243
           +GKG  ER LV L   A   +E ++         G     +F + +RA+    ++T    
Sbjct: 169 IGKGDKER-LVPLGEEAVYWLEQYMEHGRPWLLNGQTLDVMFPS-NRAQ----QMTRQTF 222

Query: 244 YRLVRGLGKKAGI---KARPHGLRHSAITDALDRTNGNIRAVRKFSRHKDFNVLVVY 297
           +  ++     AGI   K  PH +RH+  T  L+    ++R V+    H D +   +Y
Sbjct: 223 WHRIKHYATLAGIDSEKLSPHVMRHAFATHLLNH-GADLRVVQMLLGHSDLSTTQIY 278