Pairwise Alignments

Query, 706 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

Subject, 1285 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  218 bits (555), Expect = 1e-60
 Identities = 216/723 (29%), Positives = 318/723 (43%), Gaps = 91/723 (12%)

Query: 32  LVAVI-AGFW-LVAYADLERARDRAIHDGLRQTANLSTLLEEDARRVMIVADHALRATAA 89
           L+A++ AGFW  V +AD    R+  +     Q  + + LL+E  RR +  AD A+    A
Sbjct: 29  LIALLGAGFWGYVVWAD----REETLRHSREQAQSTARLLQEHVRRTVATADLAIGR--A 82

Query: 90  EGTIPAYLVGETAGALGSTTGPGPALRNLMIVERD--GRVRQAAGLHKPAHVADSPLAEA 147
           +  I  Y      G  G  T      R   I  RD    + + A L   A   D+ L   
Sbjct: 83  QDLIRHY------GMPGLDTN-----REAWITVRDMVDSLPEIAALWIDAATGDAVLTSR 131

Query: 148 ------LMGESRAFVGPYREADGGWRAAMIRPLANGS----------------AMAVAVL 185
                 +    R+F   +           I     G+                 +  A +
Sbjct: 132 QYPTPRVNASDRSFFKAHLNGTDFHVGERIAGRQTGTEFFTVSRSIMLEGRFQGVVHANV 191

Query: 186 DLDRFARLYATQDIGPLSIILFYGENG--VVLSHSRSGMRALDENRAFFASVLPRLPAGE 243
           DLD +++LY + D+G  + I  Y  +G  V+   +   +   D N      ++ R  A  
Sbjct: 192 DLDYYSQLYESLDLGAGAAIAVYRTDGKPVLRFPTSEPLDGPDGN------IVLRHAADA 245

Query: 244 NARTLSGLDPTEGRERIGTVRRVAGWPLYVYVRIRTEDVLAGWYDDRWKRILETAAVSVV 303
              T     PT G  RI + +RV   PL  +V +     LA W   R + +  +  V + 
Sbjct: 246 AIETFEADGPTPGSRRILSYQRVPNLPLVAFVALSERTELAPW---RERTLRGSVLVGLA 302

Query: 304 VLL---LACLALRQLGR---------------------LETTTQALRASERRSQALFDSS 339
           VL    LA  ALR L R                     LET  +A  ++ RR   +  S+
Sbjct: 303 VLACAGLAYTALRSLEREVAGRRMLADTNAELDTKKSELETANEAFASANRRLNLILHSA 362

Query: 340 FQIMGLLAPDGRVLALNRPACALAGLPAEALVGHRAWEFRGWARTD--ELAAAFRQSIEK 397
              +  +  DG +   N    AL G   E L+G          R D     A      E 
Sbjct: 363 SDSICGIDRDGTITFANPATSALTGYSNEELLGGNLHALIHSRRADGSHFPALECPVTEV 422

Query: 398 AASGRFVRYETDVV--ADGLTRVMDVTIKPVYDDGGVVTVLVVEARDITERVEAAERLAT 455
             SG   R   D      G   +++ T  P+  +G V   +VV   +I ER  A   +  
Sbjct: 423 LLSGESRRGLEDTYWSKGGTPFLVEYTASPMLAEGKVEGAVVV-FHEIAERKRAEAAMQR 481

Query: 456 ALDQAEAANRAKSAFLATMSHELRTPLNAIIGFSDIMLHELFGPLGSPRYRDYARHVQNS 515
           A   AEAA+R+KS FLA MSHE+RTP+NAI+G    ++H L     + R  DY + V+ S
Sbjct: 482 ARLAAEAASRSKSEFLANMSHEIRTPMNAILG----LIHLLQQTDLNGRQADYVQKVRVS 537

Query: 516 GRHLLDLINDVLDMSKLEAGRYTLDESWMEPAEAIETCRALAAVPADVGGVTLAVECPPD 575
            + LL ++ND+LD SK+EAG+  L+       + ++T   +    A    + +     PD
Sbjct: 538 AQSLLGILNDILDFSKVEAGKLELERVDFRLDDLLQTLAVIVGSAAQEKDIDVLFSVAPD 597

Query: 576 LP-NLLADERALRQVLLNLLSNAVKFTPRGGRVTVSAVR-EGDGRIAI--TVRDTGIGIA 631
           +P +L+ D   L+QVL+NL  NA+KFT  G  V   AV+ +GD R  +   VRDTGIGIA
Sbjct: 598 VPLDLIGDPLRLQQVLINLAGNAIKFTEAGEVVVSVAVKAQGDDRAVLEFAVRDTGIGIA 657

Query: 632 ADALARILEPFQQADSSISGRFGGTGLGLSICRDLMALHGGSLSIDSEPGLGTAATIRFP 691
            +   R+ + F Q DSS + RFGGTGLGL+IC  L+ L  G++ ++SEPG G+    +  
Sbjct: 658 PEQRDRLFQAFSQGDSSTTRRFGGTGLGLAICARLVRLMKGAMDVESEPGKGSVFRFQAE 717

Query: 692 ADR 694
            DR
Sbjct: 718 FDR 720