Pairwise Alignments

Query, 542 a.a., Cytochrome c oxidase subunit 1 from Alteromonas macleodii MIT1002

Subject, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

 Score = 75.1 bits (183), Expect = 6e-18
 Identities = 72/323 (22%), Positives = 139/323 (43%), Gaps = 31/323 (9%)

Query: 212 LFVWTWLITAFLLIAVMPVLAGAVTMVLTDKFFGTSFFDAAGGGDPVMFQHIFWFFGHPE 271
           ++V  W   AF+++  M  +   +++ ++   F +  + A  G    M Q   W++GH  
Sbjct: 158 IYVGNWFYGAFIVVTAMLHIVNHISLPVS--LFKS--YSAYSGATDAMIQ---WWYGHNA 210

Query: 272 VYIMILPAF-GIISQIVPTFSRKQLFGYA-SMVYATASIALLSFVVWA--HHMFTTGMPV 327
           V   +   F G++   VP  + + ++ Y  S+V+  A   L++  +WA  HH+  T +P 
Sbjct: 211 VGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWA---LITLYIWAGPHHLHYTALPD 267

Query: 328 YMEMFFMFATMLISVPTGVKVFNWVATM---WRGSLSFEMPMMFAIAFIVLFTIGGLSGL 384
           + +   M  ++++  P+   + N + T+   W   L  +  + F +  +  + +    G 
Sbjct: 268 WAQSLGMVMSIILLAPSWGGMINGMMTLSGAWH-KLRTDPILRFLVVSLAFYGMSTFEGP 326

Query: 385 MLAITPVDFQYHDTYFVVAHFHYVLVTGAVFSIMAAVYYWLPKWTGK--MYDTTLAKWHF 442
           M+AI  V+   H T + + H H   +       + AVY+ +PK  G+  M+   L   HF
Sbjct: 327 MMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHMIPKLYGREQMHSIGLINAHF 386

Query: 443 WCSLVSVNVLFFPMHFVGLAG--MPRRIPD---------YALQFADFNKWISLGGFAFGL 491
           W + +   +    M   G+    M R I D          ALQ +     +   G AF  
Sbjct: 387 WLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEALQASHPGYIVRALGGAFFA 446

Query: 492 SQLIFLALLIKACKKQGEPVSAQ 514
           S ++ +A  +    +   P  A+
Sbjct: 447 SGMLLMAYNVFRTVRAANPAQAE 469