Pairwise Alignments

Query, 326 a.a., Cyn operon transcriptional activator from Alteromonas macleodii MIT1002

Subject, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 71/298 (23%), Positives = 137/298 (45%), Gaps = 17/298 (5%)

Query: 4   KQLHYFVMTVRKGSIAAAARALDIAQPAISQQLASLEREMKATLLERSFSGVNLTSAGDV 63
           + +  FV     GS   AA AL ++QPA+S+++  LE  +  +LLER+   V+LTS G  
Sbjct: 6   QDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGRD 65

Query: 64  FYKHALKLLTEIDNVKAALEAFQTGQKKVVKIGMLPSIGNVLSLPLLTEITANHKGLKVE 123
           F   A +LL + ++   ++      Q   V +  +P+        ++ +    +  +++ 
Sbjct: 66  FLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIRIR 125

Query: 124 ISTGPSYTINDWLES---KQVDVALTYQQAVDPKFMRVTPLIQEDLHLVFSASSSCEQYA 180
           +      + ND LE+    + D  +       P    V+ L+QE  H V     +C +  
Sbjct: 126 LL---DLSANDGLEAVLRGEADFGINMMSGQHPDIEFVS-LVQE--HFVL----ACRRDH 175

Query: 181 KLRDRTTIRFWEISELPLLSPGNKDALGQLIADYEKATGVSLQHDLAYSGQ-LMTGLRQV 239
            L +R ++ + E+++  L+  G      +++ D+   +G++L+    Y  Q L T L  V
Sbjct: 176 PLANRASVTWTELADYRLIGVGRLSG-NRMLLDH-ALSGLNLRPKWFYEVQHLSTSLGMV 233

Query: 240 MQGEGVMILPTSAIFHLKESGLVSSLKITQPEMQRTVLAATNKSAKTLLDSSPIIDIL 297
             G GV  +P+ A+ +     LV S+ + +P++ RT+     + A     +   + IL
Sbjct: 234 EAGLGVSAMPSLAMPNADHPTLV-SVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSIL 290