Pairwise Alignments

Query, 236 a.a., exodeoxyribonuclease III (xth) from Alteromonas macleodii MIT1002

Subject, 255 a.a., Endonuclease/exonuclease/phosphatase from Variovorax sp. SCN45

 Score = 80.9 bits (198), Expect = 2e-20
 Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 17/244 (6%)

Query: 3   RIVTYNIHSG---IGRDKKHDYKRIGQFLANSGADVVLLQEMDTRPSERSTAQDVK---- 55
           R+ TYNIH G   IG  ++ +   +G  +    AD+V LQE+  + + ++ A+  +    
Sbjct: 13  RVATYNIHKGVQGIGPARRLEIHNLGHAIEQLDADIVCLQEV-RKMNRQAAARFARWPEL 71

Query: 56  ---DICAENTFKLIPSPAIRESDGWYGNAILTRFDVLAHDTLDVSQNGRQPRNVQIVELK 112
              D  A   +  +         G +GNA+LTR+ VL     D+S +  + R +  V + 
Sbjct: 72  PQADFLAPEGYTAVYETNAVTRHGEHGNALLTRWPVLRTSHQDISDHRFEQRGLLHVVID 131

Query: 113 TEKTPLTVVNTHKGLKKLERRSQFSLLHEHLSLKMKEKQIPLVLAGDFNEW----QFFSK 168
            E   +  +  H GL K  R  Q + L E +  ++   +  +V+AGDFN+W    ++   
Sbjct: 132 VEGRRVHAIVVHLGLIKGSRVRQIARLREFIDREVPPDE-AVVVAGDFNDWGARMRYAMN 190

Query: 169 AFKALNDLLLQQKVGATFPSHFPVFALDRVWVSDDIKVKACRKLKNAKTRILSDHLPVLV 228
           A    +   L+     T+PS  PV  LD V+    ++  AC   +      +SDHLP++ 
Sbjct: 191 AMGMRDTSDLRGPRTLTYPSRLPVAQLDFVY-GRRLEPLACAVPRGPIWARMSDHLPLVA 249

Query: 229 DIEL 232
           D  L
Sbjct: 250 DFSL 253