Pairwise Alignments

Query, 236 a.a., exodeoxyribonuclease III (xth) from Alteromonas macleodii MIT1002

Subject, 284 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 63/252 (25%), Positives = 95/252 (37%), Gaps = 34/252 (13%)

Query: 3   RIVTYNIHSGIGRDKKHDY------------------KRIGQFLANSGADVVLLQEMDTR 44
           R++++NI  GI  ++   Y                  ++IG+ L +   D+V LQE D  
Sbjct: 34  RLLSFNIQVGISTERYRHYLTRSWQHLLPHNGRAGNLQKIGRLLGDF--DLVALQEADGG 91

Query: 45  PSERSTAQDVKDICAENTFKLIPSPAIRESDGW--YGNAILTRFDVLAHDTLDVSQNGRQ 102
                    V+ +     F        R    +  + N +L+R      +  D    G  
Sbjct: 92  SLRSGYVNQVEHLAHLGAFPYWYQQLNRNLGRFAQHSNGVLSRLKPQLLE--DHPLPGPA 149

Query: 103 PRNVQIVELKTEKTPLTVVNTHKGLKKLERRSQFSLLHEHLSLKMKEKQIPLVLAGDFNE 162
            R   +V     +  L VV  H  L    R  Q   + E +     +     VL GD N 
Sbjct: 150 GRGAILVRFGEGEDALIVVMMHLALGAKTRALQLGYIRELIGGYRHQ-----VLMGDMNT 204

Query: 163 WQFFSKAFKALNDL-LLQQKVGATFPSHFPVFALDRVWVSDDIKVKACRKLKNAKTRILS 221
                     L DL L+  +V ATFPS  P   LD + +S  + ++    L       +S
Sbjct: 205 HATDLLEHSPLRDLGLVAPQVEATFPSWRPQRCLDHILLSSSLTLERVEVLAQP----IS 260

Query: 222 DHLPVLVDIELP 233
           DHLPV V+I LP
Sbjct: 261 DHLPVAVEIRLP 272