Pairwise Alignments

Query, 677 a.a., ATP-dependent zinc metalloprotease FtsH from Alteromonas macleodii MIT1002

Subject, 764 a.a., AAA family ATPase Cdc48 from Sphingobium sp. HT1-2

 Score = 78.6 bits (192), Expect = 1e-18
 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 9/125 (7%)

Query: 475 LISGPPGTGKTAYAHYLAELNNRKLLRVKCSDVLSKWVGESEQKIAELFQRA-HAEEQVI 533
           L+ GPPGTGKT  A  +A       +  K SD+LSKW GESEQ+IA LF RA      VI
Sbjct: 518 LLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKWYGESEQQIARLFARARQVAPTVI 577

Query: 534 LLDEVDSLLSAREGLSAQHEL--QFVNEFLTQI----ECFTQPLFAATNFVTKLDKAVLR 587
            +DE+DSL+ AR G   +  +  + VN  L ++    E  +  +  ATN  T +D A+LR
Sbjct: 578 FIDELDSLVPARGGGLGEPAVTERVVNTILAEMDGLEELQSVVVIGATNRPTLVDPALLR 637

Query: 588 --RFD 590
             RFD
Sbjct: 638 PGRFD 642



 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%)

Query: 471 PSRTLISGPPGTGKTAYAHYLAELNNRKLLRVKCSDVLSKWVGESEQKIAELFQR-AHAE 529
           P   ++ GPPGTGKT  A  +A  +  +   +   +++    GESE+K+ ++F+  A A 
Sbjct: 241 PKGVMLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKKLRDIFEEAAKAA 300

Query: 530 EQVILLDEVDSLLSAREGLSAQHELQFVNEFLTQIECF----TQPLFAATNFVTKLDKAV 585
             ++ +DE+DS+   R  ++ + E + V + LT ++         + AATN    +D+A+
Sbjct: 301 PSILFIDEIDSIAPKRGQVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEAL 360

Query: 586 LR--RFD 590
            R  RFD
Sbjct: 361 RRPGRFD 367



 Score = 33.5 bits (75), Expect = 4e-05
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query: 227 RVGTSVLLYGDSGTGKTELSRALAKRCGRTLYEIRSTALASKY 269
           R     LLYG  GTGKT L++A+A+         +S+ L SK+
Sbjct: 512 RPAKGFLLYGPPGTGKTLLAKAVAREAQANFIATKSSDLLSKW 554