Pairwise Alignments

Query, 240 a.a., Inner membrane protein YgaZ from Alteromonas macleodii MIT1002

Subject, 231 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score = 75.5 bits (184), Expect = 9e-19
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 12/207 (5%)

Query: 12  QGVIDGLPLLGGYIPVAISFGVIAVQAGFSTLEATLISVFIYAGASQFLLVAMVASGAPL 71
           +G I  +PL     P  +  G +A+ A FS L+A  +S  ++AGA+Q + + MV SGA L
Sbjct: 12  RGAIAVIPLSLACAPWGLLAGSMAIDAQFSPLQAQGLSAIVFAGAAQLVAIGMVKSGASL 71

Query: 72  WLAVCMTLLVNVRHVVYAPNLVPYL-PQSKAWPY-LMHGLTDQIFALAHTRLPLMDDAKK 129
              V  TLL+  +H++Y  +L P L P    W   L   LTD+ FAL    +   D    
Sbjct: 72  ISIVLTTLLLTSQHLLYGMHLRPVLSPLKTRWRMSLGFLLTDEFFAL----VSHYDRETF 127

Query: 130 VDWFK-GVSMVAWLSWIVGTALGGIAGDSLTQQWPILDSV-MPFALPALFLVLLAPKFSS 187
             W+  GV +  ++ W + T  G + G S+    P LD + + F++ A F+ L+ P    
Sbjct: 128 NRWYALGVGLTFYIVWNLFTLAGIVLGKSI----PGLDQLGLEFSIAATFIALITPVVRD 183

Query: 188 KLWSATLFVTMTAALFLALSAFKNAAI 214
                 + V++  +++L+   +++A +
Sbjct: 184 IPTVVCVAVSLLFSVWLSFLHWESAVV 210