Pairwise Alignments

Query, 347 a.a., Twitching mobility protein from Alteromonas macleodii MIT1002

Subject, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 1e-40
 Identities = 113/361 (31%), Positives = 187/361 (51%), Gaps = 46/361 (12%)

Query: 3   ITELLAFSVKNNASDLHLSA---GLPPIIRVDGEMRKLNVPALDHKQVHGLVY---EIMN 56
           +  LL  + ++ ASD+H+           R+DG +R++  P   ++ +H  +    +IM 
Sbjct: 112 LNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQP---NRALHAALISRLKIMA 168

Query: 57  DMQRKEYEENLETDFSFEVNGLS-RFRVNAFVQNRGAAAVLRTIPSKV--LTLDDLGAP- 112
           D+   E     +   S  +   +   RV+      G  AVLR +      LTL+ +G   
Sbjct: 169 DLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLTLESVGMQG 228

Query: 113 ---EIFKEIINQPTGIVLVTGATGSGKSTTLAAMVDHINTHKREHILTIEDPIEFVHDNK 169
              + F+++I+QP GI+LVTG TGSGK+TTL A +  ++   R +I+T+EDPIE+    +
Sbjct: 229 DTLDRFEKLISQPHGIILVTGPTGSGKTTTLYAALARLDA-SRSNIMTVEDPIEY----E 283

Query: 170 LSLVNQREVHRDTH-SFNNALRSALREDPDVILVGELRDLETIRLAISAAETGHLVFGTL 228
           L  V Q +++     +F  ALR+ LR+DPDVI++GE+RD ET ++AI A+ TGHLV  TL
Sbjct: 284 LPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLATL 343

Query: 229 HTNSAPKTIDRIIDVFPAEEKAMVRSMLSESLRAVISQTLLKKV---------------- 272
           HTN +   + R+ D+       +   +LS SL  V++Q L++KV                
Sbjct: 344 HTNDSVSAVTRLTDM------GVEPFLLSSSLLGVLAQRLVRKVCTACAGAGCEVCGQTG 397

Query: 273 GGGRVAAHEIMVGIPAIRNLIREDKVPQMYSVIQTGQAHGMQTMDQCLQRLVAMGVITKQ 332
             GR    E++V    ++ LI          ++Q G   G++ M +  +RLV  G+ ++ 
Sbjct: 398 YQGRTGIFELLVADETVQGLIHSKAAES--ELLQAGARGGLRLMREDGERLVQAGITSRA 455

Query: 333 D 333
           +
Sbjct: 456 E 456