Pairwise Alignments

Query, 242 a.a., Ribosomal RNA small subunit methyltransferase E from Alteromonas macleodii MIT1002

Subject, 235 a.a., 16S rRNA (uracil(1498)-N(3))-methyltransferase from Fusobacterium nucleatum SB010

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 26  HHIATVLRIKPNRPIVLFNGDGNEYSAQIISVQRKKVTVEADACLSLAKESPLHLHLGQG 85
           +HI  V R      I   +G  NEY  +I  +  K++ ++    +       + +  G  
Sbjct: 23  NHIKNVFRKVKGDRIRAVDGT-NEYLCEIEKIDEKEIKLKILEKIEDNFSLDIEVDAGIS 81

Query: 86  VSKGDRMDTVLQKSVELGVSEITPVITERCTVKLDESRWEKKIQQWQKIIIGACEQSGRN 145
           + KGD+MD  +QK  ELG+++I P+  +RC VKLD     KK  +W  I   A +Q  + 
Sbjct: 82  ILKGDKMDLTIQKLTELGINKIIPISVKRCIVKLD-----KKKDRWGTISKEALKQC-QG 135

Query: 146 IIPALNAPVSLNQWLSSSTNTTRLVLAPGAEQS-------LARQPYNAQGFRLLIGPEGG 198
           ++P +   +     L  +     L+L P   +        L            +IG EGG
Sbjct: 136 VVPTVIDEIKKIDKL--NLKDYDLILVPYENEKKVFIKDILRNLKVKPTKILYIIGAEGG 193

Query: 199 LSETEIHQANENGYQSVSLGPRILRTETAAITSLSIL 235
             + EI    ENG + +SLG RILR ETAAI +  ++
Sbjct: 194 FEKEEIDYLKENGAKIISLGKRILRAETAAIVTGGVI 230