Pairwise Alignments

Query, 242 a.a., Ribosomal RNA small subunit methyltransferase E from Alteromonas macleodii MIT1002

Subject, 239 a.a., Ribosomal RNA small subunit methyltransferase E from Acinetobacter radioresistens SK82

 Score =  179 bits (455), Expect = 3e-50
 Identities = 100/233 (42%), Positives = 131/233 (56%), Gaps = 1/233 (0%)

Query: 3   IPRVYYPNPIPLEQEFELTEDAGHHIATVLRIKPNRPIVLFNGDGNEYSAQIISVQRKKV 62
           +PR Y    + +    ELTE   HH   VLR +      LFNG G E+ A +  + +K  
Sbjct: 1   MPRFYIEADLTVGTTVELTETVFHHWVKVLRAQIGDSATLFNGRGGEFEANLTEISKKTA 60

Query: 63  TVEADACLSLAKESPLHLHLGQGVSKGDRMDTVLQKSVELGVSEITPVITERCTVKLDES 122
           +V   +     +  P    LGQ +SKGDRMD V+QK+ ELGV+ I  + +ERC ++L   
Sbjct: 61  SVAIRSSNPADRTPPFTTVLGQVMSKGDRMDYVIQKATELGVTTIQLLTSERCEMRLKYD 120

Query: 123 RWEKKIQQWQKIIIGACEQSGRNIIPALNAPVSLNQWLSSSTNTTRLVLAPGAEQSLARQ 182
           R +KK+  WQ ++I ACEQ G N IP +  PV L  WL  +   TRLVLAP   Q     
Sbjct: 121 RDQKKLDHWQAVVIAACEQCGMNRIPEILPPVPLTDWLQQNLPATRLVLAPNKRQQNVLT 180

Query: 183 PYNAQGFRLLIGPEGGLSETEIHQANENGYQSVSLGPRILRTETAAITSLSIL 235
                   LLIGPEGGLSE EI  AN  G+++  +G RILRTETA + +LSIL
Sbjct: 181 DAQTD-LALLIGPEGGLSEAEIDMANHAGFKNWCIGERILRTETAPVVALSIL 232