Pairwise Alignments

Query, 280 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

Subject, 878 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  103 bits (257), Expect = 1e-26
 Identities = 57/217 (26%), Positives = 115/217 (52%), Gaps = 2/217 (0%)

Query: 52  LMAKSKYDNMLVDFLEAILSAILMLFVIVASLDQLGVDTTSLVAILGAAGLAIGLSLQDS 111
           L+ ++  +  L   +  I+  +  +  ++ ++ QLG++  ++  + GA  + IG  LQ  
Sbjct: 636 LLPRTGLEPSLQSSIATIVGYVGTIVAVMVAMGQLGLNLENIALVAGALSVGIGFGLQSI 695

Query: 112 LKNFAAGVMLLVFKPFKAGDFVEAAGTAGSIVKIGIFTTTMNTPDNKEIIVPNGNIYGGN 171
           + NF +G++LL  +P + GD +   G  G + +I + +T + T +   +IVPN ++  G 
Sbjct: 696 VSNFVSGLILLAERPIRVGDTINVKGEEGYVRRISVRSTEIETFERATVIVPNADLITGM 755

Query: 172 ITNYS-ARDTRRVDMVVGIGYDADLLKAKRILEEMVAADERILAEPAPKIAVSELADSSV 230
           + N++ +  T R+ + V + YD+D  + + IL        ++L  P P++ + + AD+ +
Sbjct: 756 VKNWTHSNTTGRIIVAVTVSYDSDPEEVRDILVGCACDHPQVLQTPPPRVFLMKFADAGI 815

Query: 231 NFVVRPWVNSADF-WGVKFDFTENVKLRFDEEGISIP 266
            F +R  V + D+   VK D    V  RF + G+S+P
Sbjct: 816 VFELRCVVANVDYALTVKSDLHFQVLSRFRKAGVSMP 852