Pairwise Alignments

Query, 319 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

Subject, 310 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  294 bits (752), Expect = 2e-84
 Identities = 152/309 (49%), Positives = 211/309 (68%), Gaps = 5/309 (1%)

Query: 3   SSVLSSVDQRTKLVGENRLELLMFQLGTRHIFAMNVFKIKEVINVPKLNIMPGSHHNLKG 62
           + V+ SV+QRT+LVG+NRLELL+F+L  + ++ +NVFK++EV+  PKL IMP S   + G
Sbjct: 2   AGVMDSVNQRTQLVGQNRLELLLFRLDGKQLYGINVFKVREVLQCPKLTIMPKSSPVVCG 61

Query: 63  VMNYRGSSIPIIDLRQAIKMRGAATQATAKNVIITEYNRSVQGFIIGEVKNIVNTSWGTI 122
           V N RG++IPI+DL  A    G   + +   VIITEYN   QGF++  V+ IVN +W  I
Sbjct: 62  VANIRGATIPILDLALATGSAGLQDRESPF-VIITEYNTKTQGFLVRSVERIVNMNWEEI 120

Query: 123 QPPPSGIGKSNYLTAITQVNVEGKQELVEIIDVEKVLAEIIDYDTSISEEVLDKDIVNHF 182
            PPP G G+ +YLTA+T+V+     +LVEIIDVEK+LAE+     +IS  V+D +  +  
Sbjct: 121 HPPPKGTGRDHYLTAVTRVD----NQLVEIIDVEKILAEVAPTSETISVGVVDAETAHKA 176

Query: 183 LGKKVLIVDDSGTARKQMKDTLEQLGITIIERKNGAQALALLKKWADEGKNPTDEILLMF 242
           +  +VL VDDS  ARKQ+   L+ +G+ ++   +G QAL  L+K  D+GK P +E L+M 
Sbjct: 177 VSLRVLTVDDSSVARKQVTRCLQTVGVEVVALNDGRQALDYLRKLVDDGKKPEEEFLMMI 236

Query: 243 TDAEMPEMDGYRLTSEVRNDPRMSNLFIALNTSLSGSFNDAMVEKVGCDRFISKFQPDML 302
           +D EMPEMDGY LT+E+RNDPRM  L I L+TSLSG FN AMV+KVG D F++KF+PD L
Sbjct: 237 SDIEMPEMDGYTLTAEIRNDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDL 296

Query: 303 VDVAQQRLR 311
                 R++
Sbjct: 297 ASRVVDRIK 305