Pairwise Alignments

Query, 309 a.a., Chemotaxis protein MotB from Alteromonas macleodii MIT1002

Subject, 336 a.a., flagellar motor protein MotD from Rhodanobacter sp000427505 FW510-R12

 Score = 90.1 bits (222), Expect = 6e-23
 Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 27/283 (9%)

Query: 16  AWMGTFADLMSLLMCFFVLLLSFSEMDVLKFKQIAGSMKFAFGVQNKIEVKDIPKGTSVI 75
           AW   +ADLM+LL+ FFV++ + S ++  KF+ ++ S+  AF   ++  +  +P      
Sbjct: 14  AWAIPYADLMTLLLAFFVVMYAVSVVNEGKFRVMSESLIEAFNGSSR-AIAPLP------ 66

Query: 76  AMEFRPGKPDPTPIESIQQQTNEMTQQMLEFQAGNEDSAGGRQKQRGEQRGGQSQQTATE 135
             + RP    P       Q  + +    +        ++GG  ++ G +           
Sbjct: 67  PTKIRPHNIAPAIAAPSGQSGSSIVPIAVPIPPHPVPASGGSGREAGHK----------- 115

Query: 136 SSSSAEQSTDQSQMAELMKKVAQQLEKQILDGSVEMESLGQQLTIRIRENGSFSAGSAFL 195
               A+      ++ + ++K  Q L  + L   V +      L I IR +  F +G A L
Sbjct: 116 ----AKPPETLGRIEDQVRKALQPLIDRKL---VVVRHKPDWLEIEIRTDILFPSGVAQL 168

Query: 196 QPQFQPVLRKIGTLLADVPGEIEISGHSDGQHIANELYRSNWDLSAQRAVAVAEAMRTAP 255
                 VL  +  +LA     + + G +D   I+N LY SNW+LSA RA +VA    T+ 
Sbjct: 169 SEPATEVLHDLAAILASFGNPLRVEGFTDDMPISNTLYPSNWELSAARAASVARLFSTS- 227

Query: 256 GFDESRMSVVGKADTDPIVENATSPSDRAQNRRVEININQGKP 298
           G   +R+ ++G  +T PI +NAT    R QNRRV + +    P
Sbjct: 228 GIAPARLGIIGWGETRPIADNAT-VEGRNQNRRVVVVVMSDHP 269