Pairwise Alignments

Query, 478 a.a., Na(+)/dicarboxylate symporter from Alteromonas macleodii MIT1002

Subject, 609 a.a., putative transporter from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 8/212 (3%)

Query: 45  EIIFTAAITLFVAVLWVTEALPIPATSLLPFALFPLFGVLSHSEAASALGSHVIILLMAA 104
           E+++   +   V +L+V     +   +LL     PL G+L+  +A +      ++L+ A 
Sbjct: 4   ELLWVLGLLAIVIILFVINRPRMDVVALLVILALPLLGILTVEQALAGFSDPNVVLIAAL 63

Query: 105 FMLSKGLERANLHKRFAIYMLRITGSGSPLKLVLGFMLTTAVLSMWISNTATILMMLPMA 164
           F++ +GL R  +  R   +M    G+     LVL  M+  A L   +S+T  + + +P+ 
Sbjct: 64  FVIGEGLVRTGIAYRIGEWMSERAGNSEARLLVL-LMVAVAGLGSIMSSTGVVAIFIPVV 122

Query: 165 IAIINAVD-NPRFGVALILGIAYSASLGGVGTPIGTPPNIIFMSVYEETQGIEYSFIDWM 223
           ++I   +  +P     L++ +A++  + G+ + + TPPN++  S         +SF  + 
Sbjct: 123 LSIAARLQLSPS---RLMMPLAFAGLISGMLSLVATPPNVVVHSELVRHGEAGFSFFSFT 179

Query: 224 KTGVPIVILGVPIMAL---WLARGIKQVGNID 252
             G+ +++LG+  M L   WL   +++ G ++
Sbjct: 180 PFGLVVLVLGIGYMLLTRHWLNGEVRKDGRVE 211



 Score = 59.7 bits (143), Expect = 3e-13
 Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 13/195 (6%)

Query: 50  AAITLFVAV-LWVTEALPIPATSLLPFALFPLFGVLSHSEAASALGSHVIILLMAAFMLS 108
           A ++L V V L V+ A+P    +L+   L      +  + A  A+    ++L++     +
Sbjct: 420 ALLSLAVMVGLMVSGAVPNVIAALIGCLLMGAGRCIDMNSAYRAIHWQSLVLIVGMLPFA 479

Query: 109 KGLERANLHKRFAIYMLRITGSGSPLKLVLGFMLTTAVLSMWISNTATILMMLPMAIAII 168
           + L++          ++ + G   P  ++      TAV+ ++ISNTAT ++M P+A++  
Sbjct: 480 QALQKTGGIDLAVGGLVNVLGGAGPSAILACLFAVTAVIGLFISNTATAVLMAPVAVSTA 539

Query: 169 NAVDNPRFGVALILGIAYSASLGGVGTPIGTPPNIIFMSVYEETQGIEYSFIDWMKTGVP 228
             +    +  A+ + +A SA+     TP+ +P N + +         +Y F D++K GVP
Sbjct: 540 AQLGMSPYPFAMTVALAASAAF---MTPVSSPVNTLVLGPG------QYRFADFVKIGVP 590

Query: 229 ---IVILGVPIMALW 240
              +V+L   +M  W
Sbjct: 591 FTVLVMLVTVVMVPW 605



 Score = 54.7 bits (130), Expect = 9e-12
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 1/135 (0%)

Query: 335 IPWGMLLLFAGGICIAKAFMSSG-LSVLMGTWLTGLSTLPVLLLVLGICLFVTFLTEITS 393
           I W  L+L  G +  A+A   +G + + +G  +  L       ++  +      +    S
Sbjct: 464 IHWQSLVLIVGMLPFAQALQKTGGIDLAVGGLVNVLGGAGPSAILACLFAVTAVIGLFIS 523

Query: 394 NTATSTLLMPILAAAGMAVGVDPKLLMIPAAISASCAFMLPVATAPNAIAYSTEKFDIKT 453
           NTAT+ L+ P+  +    +G+ P    +  A++AS AFM PV++  N +     ++    
Sbjct: 524 NTATAVLMAPVAVSTAAQLGMSPYPFAMTVALAASAAFMTPVSSPVNTLVLGPGQYRFAD 583

Query: 454 MAREGVVLNVLVALV 468
             + GV   VLV LV
Sbjct: 584 FVKIGVPFTVLVMLV 598



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 340 LLLFAGGICIAKAFMSSGLSVLMGTWLTGLSTLPVLLLVLGICLFVTFLTEITSNTATST 399
           ++L A    I +  + +G++  +G W++  +      L++ + + V  L  I S+T    
Sbjct: 57  VVLIAALFVIGEGLVRTGIAYRIGEWMSERAGNSEARLLVLLMVAVAGLGSIMSSTGVVA 116

Query: 400 LLMPILAAAGMAVGVDPKLLMIPAAISASCAFMLP-VATAPNAIAYS 445
           + +P++ +    + + P  LM+P A +   + ML  VAT PN + +S
Sbjct: 117 IFIPVVLSIAARLQLSPSRLMMPLAFAGLISGMLSLVATPPNVVVHS 163