Pairwise Alignments

Query, 302 a.a., Hca operon transcriptional activator from Alteromonas macleodii MIT1002

Subject, 290 a.a., HTH-type transcriptional activator CmpR from Acinetobacter radioresistens SK82

 Score = 69.7 bits (169), Expect = 8e-17
 Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 15/257 (5%)

Query: 4   LTQLKTFVEVYRSGNITRAAARLHMSQPAVTSHIQAMENIVGKELFIRKARGVEPTAIAD 63
           L   + FV+V  +G+I++AA +L ++QPAVT  I ++E+  G +LF    RGV+ T  A 
Sbjct: 3   LAAFEAFVKVMETGSISQAAEQLFITQPAVTKRIHSLEDYFGVKLFESAGRGVQATHAAH 62

Query: 64  DLALQVASHIDTLEQKVASIRSRASTDHGTLHLAGPAEYLSLVAGP--ALANLLQADKVN 121
            L  +V + ++ L     ++    S   G L + G + ++ L   P      + Q   V 
Sbjct: 63  SLLPKVKNWLNELGDIHHTLSHEQSQVQGRLKI-GTSHHIGLHHLPHHLKKYVQQFPDVT 121

Query: 122 LVIHTGNKSNIY-HLLENDVAELAITASEPTDAMYEYQKLDKERLILVMNRVQGKLLGER 180
           L +H  +    +  +L  D+    +T     D+   Y  +  + L+ V       LL +R
Sbjct: 122 LDVHFVDSEQAHEQVLAGDLELAFLTLPPQGDSRLNYSTIWNDPLVFV--AAPFHLLAQR 179

Query: 181 EISAALLNQHKVVTYDEQLPLVRRYFSEVFNAACES-----PVAAVCPDIRAISSIIKAG 235
               + L    ++ Y   LP ++ Y S++  A  E       +      + +I  ++  G
Sbjct: 180 ----SNLKLEDLIAYPSLLPSIQTYTSQITLAEFEKKGLKPKITMSNNPLESIRMLVSIG 235

Query: 236 IGYSVLPDYLCKEGIAK 252
           +G+SVLP  L  + + +
Sbjct: 236 LGWSVLPQNLINQDLQR 252