Pairwise Alignments
Query, 1127 a.a., Cation efflux system protein CzcA from Alteromonas macleodii MIT1002
Subject, 1034 a.a., RND efflux system, inner membrane transporter from Sphingobium sp. HT1-2
Score = 239 bits (609), Expect = 1e-66
Identities = 150/516 (29%), Positives = 271/516 (52%), Gaps = 28/516 (5%)
Query: 1 MRIVDIAVKRPVAVSMFTFAVLLFGMVSLGRLSVNLLPDLSYPTLTIRTDYDGAAPGEVE 60
M++ D++V+RPV ++ + + G+V LSV PD P +++ T Y GAA VE
Sbjct: 1 MQLSDLSVRRPVFSAVVAVLMCIVGLVGYFSLSVREYPDTDPPIVSVETTYTGAAASVVE 60
Query: 61 QLVSKPIEEAIGVVKGVRKVTSTSRAGQSDVVLSFAWGTDMDFASLEVREKLDVL--QLP 118
+++ IE+A+ V+G++ +TSTS+ G S++ + F D+D A+ +VR+++ + LP
Sbjct: 61 TRITQQIEDAVAGVQGIQTITSTSQDGTSNINIEFDPSRDIDSAANDVRDRVGSVTQDLP 120
Query: 119 LDIEKPRLLRFNPSLDPVIKLGLTAQSDTSSLSVAQMKRLRLYAEQQVKRALESVEGVAA 178
D P + + + ++ L + + S + ++ Y ++ + +++GVA
Sbjct: 121 EDALAPEIRKVDSDARSILFLAFS-RPGWSPIQISD------YLDRNIADRFAAIDGVAR 173
Query: 179 VRVGGGLENEIHILIDQQKASQLSIPITRIIDRVSAENINAAGGRIDNAAQAFLVRTLNQ 238
V +GG I + +K + + + + +N+ GR ++ Q +R
Sbjct: 174 VTIGGEARPSTRIWFNAEKLAAFGLTPADVEAALRTQNVELPAGRFESKDQNQTLRVERP 233
Query: 239 FETLSDIENLFIGRFE-GRNIQLKDVATVESAYKDRDVVTRFNGNEGIEIAIYKEGDANA 297
F T L +GR E G ++L DVA +E ++ R N I I I ++ AN
Sbjct: 234 FATPDQFAQLVVGRGEDGYQVKLGDVARIEEGAENPYSSFRSNQGTAIGIGIIRQSGANT 293
Query: 298 VNVAQKVASRLNEVNNNLPSNYTLSEIYDQSVFIKQAIDNVKSAAVMGGILAMLVLYLFL 357
+ VAQK + + E+ LP ++ D+S+FI++AIDNV + +L +LV++LFL
Sbjct: 294 LEVAQKAKALIKELEPTLPKGMKVAIGTDESLFIERAIDNVYDTLIEAALLVILVIFLFL 353
Query: 358 KDFWATVIISVSIPVSVIATFNLMYANDISLNMMSLGGIALAVGLLVDNSIVVLENIDRH 417
AT++ +V++P+ ++AT +M+ +S+N+++L LA+GL+VD++IVVLEN+
Sbjct: 354 GSVRATIVPAVTVPICLLATCAVMWLLGLSINLLTLLAFVLAIGLVVDDAIVVLENVYHR 413
Query: 418 KKLKVAGSDNATANEKTTAEATDTEASAASEGTKEVSGAIVASTLTTMAVFVPLIFVEGI 477
E D AA GT++V AI+++TL AVFVP++F+ G
Sbjct: 414 ------------------VEQGDDPLVAAYLGTRQVGFAIISTTLVVCAVFVPVMFLAGQ 455
Query: 478 AGQLFKDQALTVSFALAASLVVALTLIPAMAHKKKK 513
G LF++ A+ + A+ S ++L+L P + K K
Sbjct: 456 TGLLFRELAIAMIAAIGFSGFISLSLAPMLCSKLLK 491
Score = 202 bits (515), Expect = 8e-56
Identities = 155/539 (28%), Positives = 260/539 (48%), Gaps = 30/539 (5%)
Query: 570 IVSKLLSVAFKPLI--WVFNKAFDLLASAYEKLLRVSLKAKALVLATAFILAAGAIMLVP 627
+ SKLL A + + WV ++ F + Y + L +LK + L I A L
Sbjct: 485 LCSKLLKNAERGRLARWVDDR-FQRIEHGYGRWLDWTLKKPLMPLLGVAIFLGVAFFLFT 543
Query: 628 KLGMELIPTLSQGEFSVEVTLPAGSPLARTDAIISELAA-VAVNNNDGG-ETKVLRTYAM 685
+L EL P G V P G+ R A + ++ +A DG + V+RT
Sbjct: 544 RLPAELAPAEDTGVVEANVNAPEGTGFDRMMAYMQKIENDLAFLRKDGTLQNLVIRTPGG 603
Query: 686 SGTGSLISAAPNQGGDRWGRLNIV--MQP----TATASDMDAVKRALRDHLAFKPQVQAT 739
GT D + N++ ++P T T +++ + + +A +P V+
Sbjct: 604 FGTT-----------DDYNNGNVIAFLRPWEDRTITTAEVATI---INKVIADQPGVRGN 649
Query: 740 FSEPELFSFAS--PIQIEIAGYDLNQLQQYGDAIATKLASFNNFTDVTTSIRDGNPELKI 797
+ P+ I +AG L D I AS+ ++ + ++ P+++I
Sbjct: 650 AAPRSGLGRGRGLPVNIVLAGSTYEGLVAARDRIMLAAASYPGLINLDSDYKETKPQMRI 709
Query: 798 AFHHAKLARLELDASTVSQLIAAKVGGRVATQYSVEDRKVDVLVRTQENQRDDIASVRAI 857
+ L + + VSQ + + +G R T Y + VLV+ + + R +A + I
Sbjct: 710 ETDLQRAGDLGVSVNDVSQALQSLLGSRRVTTYVDRGEEYRVLVQAERDGRQTLADLERI 769
Query: 858 VVNPGSAQPIPLSAVADVFMSVGPSEITRVGQQRVALVSANLAKG-KLDEAVAVANKVID 916
V +PLSAV V GP ++ R + R ++A LA G L + +A
Sbjct: 770 QVRSRRGVLVPLSAVVTVREVAGPRQLNRYNKLRAITLTAALAPGTSLGQGLAFLED--Q 827
Query: 917 ETQLPLSLSATVTGQSEDMQSSFRSLQFALALAVFMVYLVMASQFESLLHPLLILFAVPL 976
Q P L+ G+S+ ++ + S+ L + +VYL++A+QFES +HP +I+ VPL
Sbjct: 828 ARQSPEVLAIGYRGESQSLRETGGSIWIVFGLTILIVYLLLAAQFESFIHPGVIIATVPL 887
Query: 977 AGAGSVYGLWLTNTPLNVVVFIGLIMLCGIVVNNAIVLVDRINQLRRQGVEKDTAILDAA 1036
A AG GL +T +N+ IG++ML G+ N I++V+ NQLR +G+E AI +AA
Sbjct: 888 AVAGGALGLAITGGSINLYSQIGIVMLVGLAAKNGILIVEFANQLRDEGMEIAEAIREAA 947
Query: 1037 KTRLRPIVMTTLTTVLGLLPMAFGFGEGAEIRTPMAITVIYGLLFASLLTLILLPVLYS 1095
K RLRPI+MT++ TV+G +P+ G GA R + + +++G+ A+L+TL L+P+ YS
Sbjct: 948 KRRLRPILMTSIATVIGAVPLVLRGGAGAAARHSIGVVIVFGVSLATLITLFLIPIFYS 1006
Score = 66.6 bits (161), Expect = 9e-15
Identities = 87/416 (20%), Positives = 168/416 (40%), Gaps = 35/416 (8%)
Query: 701 DRWGRLNIVMQPTATASDMDAVKRALRDHL----------AFKPQVQATFSEPELFSFAS 750
D +NI P+ D+D+ +RD + A P+++ S+ F
Sbjct: 86 DGTSNINIEFDPSR---DIDSAANDVRDRVGSVTQDLPEDALAPEIRKVDSDARSILF-- 140
Query: 751 PIQIEIAGYDLNQLQQYGDA-IATKLASFNNFTDVTTSIRDGNPELKIAFHHAKLARLEL 809
+ G+ Q+ Y D IA + A+ + VT + P +I F+ KLA L
Sbjct: 141 -LAFSRPGWSPIQISDYLDRNIADRFAAIDGVARVTIG-GEARPSTRIWFNAEKLAAFGL 198
Query: 810 DASTVSQLIAAKVGGRVATQYSVEDRKVDVLVRTQENQRDDIASVRAIVVNPGSAQPIPL 869
+ V + + A ++ +D+ + V D A + +V + L
Sbjct: 199 TPADVEAALRTQNVELPAGRFESKDQNQTLRVERPFATPDQFAQL--VVGRGEDGYQVKL 256
Query: 870 SAVADV-------FMSVGPSEITRVGQQRVALVSANLAKGKLDEAVAVANKVIDETQ--L 920
VA + + S ++ T +G + AN E A +I E + L
Sbjct: 257 GDVARIEEGAENPYSSFRSNQGTAIGIGIIRQSGANTL-----EVAQKAKALIKELEPTL 311
Query: 921 PLSLSATV-TGQSEDMQSSFRSLQFALALAVFMVYLVMASQFESLLHPLLILFAVPLAGA 979
P + + T +S ++ + ++ L A +V LV+ S+ ++ VP+
Sbjct: 312 PKGMKVAIGTDESLFIERAIDNVYDTLIEAALLVILVIFLFLGSVRATIVPAVTVPICLL 371
Query: 980 GSVYGLWLTNTPLNVVVFIGLIMLCGIVVNNAIVLVDRINQLRRQGVEKDTAILDAAKTR 1039
+ +WL +N++ + ++ G+VV++AIV+++ + QG + A +
Sbjct: 372 ATCAVMWLLGLSINLLTLLAFVLAIGLVVDDAIVVLENVYHRVEQGDDPLVAAYLGTRQV 431
Query: 1040 LRPIVMTTLTTVLGLLPMAFGFGEGAEIRTPMAITVIYGLLFASLLTLILLPVLYS 1095
I+ TTL +P+ F G+ + +AI +I + F+ ++L L P+L S
Sbjct: 432 GFAIISTTLVVCAVFVPVMFLAGQTGLLFRELAIAMIAAIGFSGFISLSLAPMLCS 487