Pairwise Alignments

Query, 313 a.a., site-specific tyrosine recombinase XerD from Alteromonas macleodii MIT1002

Subject, 319 a.a., Phage integrase:Phage integrase, N-terminal SAM-like protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  326 bits (835), Expect = 5e-94
 Identities = 157/295 (53%), Positives = 214/295 (72%), Gaps = 4/295 (1%)

Query: 10  VSFYVNAATRENTVRSYRTAIEHYERHWGGLLPATPTAIAQYLSHYADRLTSSTLAHRLA 69
           V  Y+ AATR+NT RSYR AIEH+E  WGG LPAT  ++A+YL+ +A  L+ +TL  RL+
Sbjct: 4   VDRYIEAATRDNTRRSYRAAIEHFEVTWGGFLPATSESVARYLASHAGTLSVNTLKLRLS 63

Query: 70  VLAKWHHEYGFPDPTKAPLVKKVMKGIRATHAYQTKQARPLQLEELKIIIQWLEESIKES 129
            LA+WH   GF DPTKAP+V+KV+KGIRA H  Q KQA PLQL++L+ +I WLE  I E+
Sbjct: 64  ALAQWHVSQGFVDPTKAPMVRKVIKGIRALHPAQEKQAEPLQLQDLEKVIAWLEIEIHEA 123

Query: 130 K---DYRKGLRLIRNKAILLLGFWRAFRADELTNIHVEYVTMIPNKGMSLYFPTTKGDRD 186
           K   D  + LR  R+ A++LLGFWR FR+DEL  + ++ V  I + G+SLY P +KGDRD
Sbjct: 124 KAQHDQPRLLRGRRDSALILLGFWRGFRSDELCRLQIQDVKAIADSGISLYLPRSKGDRD 183

Query: 187 NKGVTYKVPALQKLCPVTAYQDWVTAAELSKGPLFVGIDRWGHFNHKSMTSNTIINIVRE 246
           N G TY+ PALQ+LCPV AY +W+  A L +GP+F  +DRWG+ + + + +N++I ++R+
Sbjct: 184 NLGRTYQTPALQRLCPVQAYIEWINCAALVRGPVFRAVDRWGNLSEEGLHANSVIPLLRQ 243

Query: 247 CASGAGLLHPDAFSSHSLRRGFASWADSNGWSLKELMEYVGWKDPKTALRYIGSS 301
               AG+   + ++SHSLRRGFASWA SNGW LK LM YVGW+D K+A+RYI ++
Sbjct: 244 ALQRAGIA-AEHYTSHSLRRGFASWAHSNGWDLKSLMSYVGWRDIKSAMRYIDAA 297