Pairwise Alignments

Query, 491 a.a., Malate-2H(+)/Na(+)-lactate antiporter from Alteromonas macleodii MIT1002

Subject, 483 a.a., Na+/H+ antiporter NhaC from Escherichia coli ECOR38

 Score =  303 bits (775), Expect = 1e-86
 Identities = 178/484 (36%), Positives = 281/484 (58%), Gaps = 27/484 (5%)

Query: 3   NKEIKTPSLLDAMLPILALVIMMGSAVYLFADSSSYGPNQIALLLAMGLAAIIGMKNGYS 62
           N   ++P+L++++LPILA+++++G     F  ++   P +  ++L+  +AA++  + GY 
Sbjct: 4   NNTPRSPTLVESLLPILAMILLLG-----FGYAAFDLPPEPLMVLSTVIAALLVKRLGYG 58

Query: 63  WKTIEKGIVDGISMSLGACLILLAVGSLIGTWMLAGTVPTLIYFGLELLNPSFFYAAACL 122
           +  I + I   I+ ++ A LIL++VG LIGTWM+ GT+P +IY+GL L+NPS  Y  A L
Sbjct: 59  YNAILESISQKIAKTMPALLILISVGLLIGTWMIGGTIPLMIYYGLNLINPSMIYVTALL 118

Query: 123 ICAVVAMSIGSSWTTAATVGVALMGVSAGMEMSAAITAGAVVSGAYFGDKISPLSETTNL 182
           + AVV++  G+SW +A TVGVA MGV+ GME + A TAGA+V+GAYFGDK+SPLS  TNL
Sbjct: 119 VTAVVSVCTGTSWGSAGTVGVAFMGVAIGMEANLAATAGAIVAGAYFGDKLSPLSGDTNL 178

Query: 183 APAVAGTDLFEHIRYMLWTTIPSFVIALILFTVLGF-SEVGEAK-AERIEQMQLLLNESF 240
           A   A  DL+EHI ++L+TT+PS +++  + T+ G  SE+G +   E+I+ +   L   +
Sbjct: 179 AAMAAQIDLYEHIAHLLYTTLPSLILSAFVMTLYGMNSELGGSTIPEKIQLITEGLKGIY 238

Query: 241 DLGWHLLIPLVVLLTLAIKKMPAFPAVFIGALLGGVWAVVFQWDVVTSMA-SGDDSVNVG 299
                LL+P+ ++L  +I K P  P + + AL+  + A V Q   +  +  S  D  NV 
Sbjct: 239 HFNLLLLLPIAIVLYGSITKKPTIPIMLVSALVAMINASVIQGFALHDIVKSAVDGFNVS 298

Query: 300 ALKVVWTALFDGVSFSTPDENLN----SLLSRGGMSSMLNTIWLIICAMSFGAVLERVGL 355
            L                D+N+N    +LL+RGGM+SM++T+ +  CA+SF   L   G 
Sbjct: 299 ML---------------TDKNVNPLLGNLLNRGGMNSMMSTLLICFCALSFAGTLALSGA 343

Query: 356 LKRAVSAILIGAKSAGDMVSRTILTCFGTNLVTADQYISIVMPGRMYKEEFKKRGLDQLN 415
           L+  V  +L    S G M+  TI        VT +  ISI++P  M +  + +RGL   N
Sbjct: 344 LEVIVHNLLKLVHSTGTMILATIACGLTMISVTCNGQISILIPIEMLRSAYIERGLHPKN 403

Query: 416 LSRSLEDGGTLTSPLIPWNTCGAYMHSVLLVNPFDYVFYAFFNVINPILAVIYAYLGIKI 475
           L+R++ED  T+  P++PW   GAYM   L V    Y+ +A         A ++ + G  I
Sbjct: 404 LARTVEDSATIFEPILPWTAAGAYMAGTLGVATLSYLPWAILCWSGIFFATLWGFTGFGI 463

Query: 476 LRIT 479
            R++
Sbjct: 464 ARLS 467



 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 22/244 (9%)

Query: 1   MTNKEIKTPSLLDAMLPILALVIMMGSAVYLFADSSSYGPNQIALLLAMGLAAIIGMKNG 60
           +T K      L+ A++ ++   ++ G A++    S+  G N +++L    +  ++G    
Sbjct: 256 ITKKPTIPIMLVSALVAMINASVIQGFALHDIVKSAVDGFN-VSMLTDKNVNPLLG---- 310

Query: 61  YSWKTIEKGIVDGISMSLGACLILLAVGSLIGTWMLAGTVPTLIYFGLELLNPSFFYAAA 120
                + +G   G++  +   LI     S  GT  L+G +  +++  L+L++ +     A
Sbjct: 311 ---NLLNRG---GMNSMMSTLLICFCALSFAGTLALSGALEVIVHNLLKLVHSTGTMILA 364

Query: 121 CLICAVVAMSIGSSWTTAATVGVALMGVSAGME--MSAAITAGAVVSGAYFGDKISPLSE 178
            + C +  +S+  +   +  + + ++  SA +E  +     A  V   A   + I P   
Sbjct: 365 TIACGLTMISVTCNGQISILIPIEMLR-SAYIERGLHPKNLARTVEDSATIFEPILPW-- 421

Query: 179 TTNLAPAVAGTDLFEHIRYMLWTTIPSFVIALILFTVLGFSEVGEAKAERIEQMQLL--- 235
            T     +AGT     + Y+ W  +      +   T+ GF+  G A+  + +Q QL+   
Sbjct: 422 -TAAGAYMAGTLGVATLSYLPWAIL--CWSGIFFATLWGFTGFGIARLSKEKQQQLMMET 478

Query: 236 LNES 239
           +NES
Sbjct: 479 INES 482