Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Alteromonas macleodii MIT1002

Subject, 749 a.a., excinuclease ABC subunit B from Caulobacter crescentus NA1000 Δfur

 Score =  763 bits (1969), Expect = 0.0
 Identities = 394/664 (59%), Positives = 495/664 (74%), Gaps = 8/664 (1%)

Query: 5   FELHSKYKPAGDQPKAIEALVDGLESGLAGQTLLGVTGSGKTFTMANVIKEVQRPTLILA 64
           F+L S Y+PAGDQP AI  LV+GL++G   Q LLGVTGSGKTFTMA VI   QRP LILA
Sbjct: 47  FKLVSDYQPAGDQPTAIAELVEGLQNGDQDQVLLGVTGSGKTFTMAQVIARTQRPALILA 106

Query: 65  HNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIEQMRL 124
            NKTLAAQLY EMK FFP NAVEYFVSYYDYYQPEAYVP TDT+IEKD+SIN+ I++MR 
Sbjct: 107 PNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPRTDTYIEKDSSINEQIDRMRH 166

Query: 125 SATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQYKRN 184
           SAT+A++ER DV++VASVS IYG+G  E+Y  M   L  G  +D++ ++  L   QYKRN
Sbjct: 167 SATRAILERDDVIVVASVSCIYGIGSVETYTAMTFTLEVGQRVDEKQLIADLVAQQYKRN 226

Query: 185 DLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKSVIRATVF 244
           D AFERGTFR RGD I+IFPA  E +A RV +F DE++ +S FD LTG     +    V+
Sbjct: 227 DQAFERGTFRRRGDTIEIFPAHYEDRAWRVTMFGDEVEALSEFDTLTGKKTADLEMIKVY 286

Query: 245 PKTHYVTPREKILNAIEHIKEELGDRKKQLQEANKLIEEQRISQRTQFDIEMMMELGYCS 304
             +H+VTPR  +  AI  I++EL +R + L    KL+E QR+ QRT FD+EM+   G C+
Sbjct: 287 ANSHHVTPRPTLRQAIIAIRQELKERLEWLTANGKLLEAQRLEQRTTFDLEMIETTGSCA 346

Query: 305 GIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQVGAMYRGDRSRKETLVEF 364
           GIENYSRYLSGR  GEPPPT  +Y P + L+F DESH TV Q+GAMY+GDR+RK TL E+
Sbjct: 347 GIENYSRYLSGRKTGEPPPTFFEYIPDNALLFTDESHQTVPQIGAMYKGDRNRKWTLAEY 406

Query: 365 GFRLPSALDNRPLKFEEFEQICPQTIYVSATPGDYELKKTDGEIVEQVVRPTGLLDPVIE 424
           GFRLPSALDNRPLKFEE++ + PQ+++VSATP ++EL++  G   EQV+RPTGL+DP +E
Sbjct: 407 GFRLPSALDNRPLKFEEWDAMRPQSVHVSATPANWELERAGGVFAEQVIRPTGLIDPPVE 466

Query: 425 VRPV----ATQVDDVLSEIQKRVELDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI 480
           VRPV    A+QVDDV+ EI++ ++   R L+T LTK+MAEDL+EYL E G++VRY+HSD+
Sbjct: 467 VRPVSKDGASQVDDVVDEIRQTIQKGYRTLVTVLTKKMAEDLTEYLTEQGIRVRYMHSDV 526

Query: 481 DTVERIEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG 540
           DT+ERIEIIRDLRLG FDVLVGINLLREGLD+PE  LVAILDADKEGFLR+E SLIQTIG
Sbjct: 527 DTIERIEIIRDLRLGHFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIG 586

Query: 541 RAARHVNGKAILYADSITKSMKKAMDETERRREKQMAHNEANGITPMRLNKPITDIMDLG 600
           RAAR+V+GK ILYAD +T SM++AM ET RRREKQ A+N  +GITP  + + I DI+   
Sbjct: 587 RAARNVDGKVILYADRVTGSMERAMAETARRREKQHAYNLEHGITPESVKRDIKDIL--- 643

Query: 601 DSAHPASGKVRLRKVEEKKKQQKTASATELMDQITELEKQMFEYARELEFEKAASLRDDI 660
           +S +    +V L  +   +   +  S       + +LE +M E A  LEFE AA LRD+I
Sbjct: 644 NSPYERGDRV-LVPMGMSETDDRPFSGDNFKAALKDLEAKMREAAANLEFETAARLRDEI 702

Query: 661 EALR 664
           + ++
Sbjct: 703 KRMK 706