Pairwise Alignments

Query, 352 a.a., Flagellar motor switch protein FliM from Alteromonas macleodii MIT1002

Subject, 294 a.a., Flagellar motor switch protein FliM from Sphingobium sp. HT1-2

 Score =  104 bits (260), Expect = 3e-27
 Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)

Query: 53  LEIVNERFARHMRVSLFNMMRRSAEVSINGIQMIKFGEYIHTLFVPTSLNMVRFRPLKGT 112
           L+ + E+  R +R  +  +      V     ++++FG +        SL++ R  PLKG 
Sbjct: 23  LDRLGEKLGRRIRALIEPISGIRPHVVAEDARVVEFGAWSAGAPNFCSLSIYRLLPLKGQ 82

Query: 113 GLITMEARLVFILVDNFFGGDGRYHAKIEGREFTPTERRIIQMLLKIIFEDYKEAWAPVM 172
            L+ M+A ++  LVD F+GG G       G EFTPTE R+I  L + I     E W+ V+
Sbjct: 83  MLLCMDATMISTLVDCFYGGLGNRALPARG-EFTPTEDRLIARLSETIMARMVECWSEVL 141

Query: 173 DVSFEYLDSEVNPAMANIVSPTEVVVISSFHIELDGGGG-DFHVSLPYSMLEPIRELLDA 231
            +    L  E     A    P + +V+  F + LD        +  P + L  +  L+ +
Sbjct: 142 PLEPGLLLRETGIGFAAAAQPADQMVVQRFRVGLDRDREWSIDMVFPLAALRGVEALMGS 201

Query: 232 GVQSDKEDTDLRWSKALRDEIMDVKVALTTHMLDVDVPLRDVMEFKPGDIIPVEMPETIT 291
            V SD E  D  W   +   + D+++   T +   ++ L ++M+ K GDIIPV +  ++ 
Sbjct: 202 KVASDDEHVDPVWQARVARRMRDIRLPARTVLARPNLSLAELMQLKAGDIIPVTIGRSLP 261

Query: 292 VLIEDLPTFRAKLGRSRDNLALKIVEKIAR 321
           +++ D       +G  +D  A   +EKIA+
Sbjct: 262 LIVGDRIVAHGTIG-EQDGRAAFQIEKIAQ 290