Pairwise Alignments

Query, 610 a.a., Polysialic acid transport protein KpsD precursor from Alteromonas macleodii MIT1002

Subject, 861 a.a., Periplasmic protein involved in polysaccharide export from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  122 bits (306), Expect = 6e-32
 Identities = 118/475 (24%), Positives = 199/475 (41%), Gaps = 76/475 (16%)

Query: 133 NYLVAPGDKISIWLWGAVNFSDVVTVDNQGNIFIPNIGPIRVANTPAGSVNQTVTAKIRQ 192
           +Y++  GD++ I ++G    S  ++V+ +G ++IPN+GPI V     GS  Q  TA+I++
Sbjct: 150 SYVIGTGDQLLIDIYGDSQQSYDLSVNPEGRVYIPNVGPINV----GGSTIQAATARIKR 205

Query: 193 VYTNDVNVYVNLLTSTP-------------VSIFVSGPVLRPGQYAGLASDSVLYYLKRA 239
             +   ++Y +L +S P             + + + G +  PG Y   +  SV   L  A
Sbjct: 206 ELS---SIYADLNSSNPRTFMQIRLGNIRSIQVAMVGELQNPGDYTLPSFASVFNALYAA 262

Query: 240 GGIDFQRGSFRQIDVVRNGKVVATADLYAFFRNGKLPQ-MSFKDGDTILVHPIGNTIVVE 298
           GG + ++GSFR I V R+ + +A  D+Y F  NG   Q +  +D D I+V  +   + V+
Sbjct: 263 GGPN-RQGSFRNIRVFRDSRQIAEVDVYEFLMNGNQQQNVRLQDNDVIMVPAVETRVEVQ 321

Query: 299 TGARNSFTFEFLNEELNGGVVNYFA--RPGEFSSHASVSGIRNNKQFARYLSLDEFASLE 356
              R    FE   +E    ++ Y    +   ++   +V  + +  +    +S + F S +
Sbjct: 322 GPVRREGLFEIQADEDINDLIRYAGGFKSEAYTGRVAVRRVSDQAREVADVSKEAFGSFK 381

Query: 357 LSAGDTVEYLADHEPQIYRINVAGAFAGASQIMVDKGTRLIDVLDHIEADTALSDTQNIY 416
           +  GD        E    R+ ++GA     +  + +G  + D++D  E            
Sbjct: 382 VKDGDIFLIGKKLERFENRVQISGAVFHPGEFALFEGMTVKDLIDKAEG----------- 430

Query: 417 LLRESVAVKQKEIIEEGLQRLERSMYTAPISSTGEGAIRAQEAQLVADFIARARQIEPQG 476
            LR    + +       L R ++ M    +    +G +                      
Sbjct: 431 -LRGEAFLNRAT-----LYRTQQDMTLEIVPVDVKGVV---------------------- 462

Query: 477 RVVVSENGDIANILLEPNDTIVIPEVTDL-----VHVGGEVLLPQSVVFNPEATTEDYVA 531
                 NG   +I+L+  D + IP   DL     V + GEV  P +  F    T ED V 
Sbjct: 463 ------NGTAQDIILQREDVLHIPSKYDLKEEYYVKISGEVNRPGAFAFADNMTVEDLVL 516

Query: 532 WAGGFTERAEDERILIVRKNGNVTFTSINSSFLASNDSKLE--PGDQIIVLPAID 584
            AGGF E A D  I + R+  + T   I   F    D  LE   GD+ +VL   D
Sbjct: 517 KAGGFKESASDAYIEVARRVKDRTNGQIAEIFTIDIDENLEIDSGDEEVVLEPFD 571



 Score = 58.9 bits (141), Expect = 9e-13
 Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 68/300 (22%)

Query: 338 RNNKQFARYLSLDEFASLELSAGDTVEYLADHEPQIYR----------------INVAGA 381
           R N Q A   ++D   +LE+ +GD    L   +  I R                +N  G 
Sbjct: 539 RTNGQIAEIFTIDIDENLEIDSGDEEVVLEPFDHIIIRRSPGFQREKMVRVEGEVNYPGQ 598

Query: 382 FA----------------GASQIMVDKGTRLIDVLDHI--EADTALSDTQNIYLLRESVA 423
           +                 G +Q    KG +LI   ++   ++D  +        LRE   
Sbjct: 599 YTISTANERISDLLKRAGGMNQFAYAKGAKLIRRTEYFVPKSDNEVRSEN----LRE--- 651

Query: 424 VKQKEIIEEG---------LQRLERSMYTAPISSTGEGAIRAQE--AQLVADFI----AR 468
           VK+  + EEG         L R+++ +       + +  + A E  A+ V D       R
Sbjct: 652 VKENLVKEEGKNTEAEVNMLNRIDKKINDKGGDISNQKGLAADEFRAERVTDVSQSDSTR 711

Query: 469 ARQIEPQGRVVVS-------EN-GDIANILLEPNDTIVIPEVTDLVHVGGEVLLPQSVVF 520
           A ++E + + +V        EN G   +++L+  D + IP+    + + GEVL P S  F
Sbjct: 712 AAKVEFKTQEMVGIDLLKILENPGSDQDLILQEGDILSIPKELQTIRMRGEVLFPTSARF 771

Query: 521 NPEATTEDYVAWAGGFTERAEDERILIVRKNGNVTFTSINSSFLASND-SKLEPGDQIIV 579
               + + Y++ AGGFT+ A   +  ++  NG+V  T    +F+   D  K+EPG +IIV
Sbjct: 772 ESGKSFKGYISKAGGFTDNARKGKSYVIYANGDVKRT---KNFIFFKDYPKMEPGAEIIV 828