Pairwise Alignments

Query, 457 a.a., Outer membrane protein TolC precursor from Alteromonas macleodii MIT1002

Subject, 479 a.a., Outer membrane protein TolC from Pseudomonas sp. RS175

 Score =  249 bits (636), Expect = 1e-70
 Identities = 160/461 (34%), Positives = 250/461 (54%), Gaps = 29/461 (6%)

Query: 6   LSLVIGVSMTTGALA----------DDLMQVYQQALANDPLVNQAKAQRDAAFEGISISR 55
           LSL + VS  +  +A           DL+ VYQ+A+ N+  +  A+AQ  A  E +  +R
Sbjct: 5   LSLALAVSCASNGMAWAAEAPLSTRTDLVSVYQEAVDNNADLAAARAQYGAQKEVVPQAR 64

Query: 56  ANLLPQISGSVGYTTSTAERAQTLGANADDLQIVVFETDVDTIDYGLQVQMSLYDHANWL 115
           A LLP +SG        AE A        D+       +     Y   +   L+    W 
Sbjct: 65  AGLLPNLSGG-------AEVANV----RTDIDEPAAIANRSARSYQATLSQPLFRADRWF 113

Query: 116 GLDRAEKVAEQSDAQLAASMQDVIVRTVTAYFDVLRARDNVEFVGAEKRAIERQLEQTRQ 175
               A+ V EQ+  QL+A+ Q++I+++  +YF+VLR++DN+    AE+ A +RQL+Q+ +
Sbjct: 114 QFQAAKSVNEQAALQLSATEQNLILQSAESYFNVLRSQDNLASTKAEEAAFKRQLDQSNE 173

Query: 176 RFEVGLTAITDVHEAQANYDSTVAQEIQAKNQLEFALEALRVITGKYHDRLFGLNTENFA 235
           RF+VGL+  TDV ++QA+YD+  A  I A+ Q+E A EAL  +T + ++ + G+      
Sbjct: 174 RFDVGLSDKTDVLQSQASYDTARANRILAQRQVEDAFEALITLTNRQYNSIQGI-VHTLP 232

Query: 236 ATMPVPAAVDEWLETAQDKNLALLVDRLAMDIAKEDISIARSGHLPTLGLTANASRSKDD 295
              P P     W++TA  +NL LL    A+  A++ +   ++GH PTL   A   +  +D
Sbjct: 233 ILPPAPNDAKAWVDTAARQNLNLLASNYAVTAAEDTLRQRKAGHAPTLDAVARYEKGDND 292

Query: 296 ---ISNPFLQFETPY---LDSQSVAVQLNVPIYQGSRVSSQTDQAKFNYVAASQAAEQTY 349
               SNP      PY   ++ +++A+QLN+PIY G   +SQ  ++        Q  E   
Sbjct: 293 ALGFSNPNA-IGRPYGGDVEQRTLALQLNIPIYSGGLTTSQVRESYSQLTQTEQQREGLR 351

Query: 350 RQTVQSIRSSFNNVKASISTIRALEQSVVSADSALKATEAGFDVGTRTIVDVLDSTRNLF 409
           RQ V++ R+    V   +  ++A  QS++S  SA++ATE G+ VGTR IVDVLD+ R L+
Sbjct: 352 RQVVENTRNLHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLY 411

Query: 410 DARRNLAGARYDFIQSVVTLKQAAGTLTGEDVAMINRGLKP 450
            + RN   ARYD+I   + LKQAAGTL+  D+  ++R LKP
Sbjct: 412 TSVRNYNNARYDYILDNLRLKQAAGTLSPADLQDLSRYLKP 452