Pairwise Alignments

Query, 457 a.a., Outer membrane protein TolC precursor from Alteromonas macleodii MIT1002

Subject, 477 a.a., Outer membrane protein TolC from Pseudomonas sp. DMC3

 Score =  246 bits (628), Expect = 1e-69
 Identities = 157/464 (33%), Positives = 248/464 (53%), Gaps = 37/464 (7%)

Query: 6   LSLVIGVSMTTGALA----------DDLMQVYQQALANDPLVNQAKAQRDAAFEGISISR 55
           LSL + VS  +  +A           DL+ VYQ+A+ N+  +  A+AQ  A  E +  +R
Sbjct: 5   LSLAVAVSCASNTMAWAAEAPLSTKTDLVSVYQEAVDNNADLAAARAQYGAQKEVVLQAR 64

Query: 56  ANLLPQISGSVGYTTSTAERAQTLGANADDLQIVVFETDV----DTIDYGLQVQMSLYDH 111
           A LLP +SG               GA   D++  + +           Y   +   L+  
Sbjct: 65  AGLLPNLSG---------------GAEVADVRTSIDQPSAIANRSAHSYQATLAQPLFRA 109

Query: 112 ANWLGLDRAEKVAEQSDAQLAASMQDVIVRTVTAYFDVLRARDNVEFVGAEKRAIERQLE 171
             W     A+ V EQ+  QL+A+ Q++I+++  +YF+VLR++DN+    AE+ A +RQL+
Sbjct: 110 DRWFQYQAAKDVNEQAALQLSATEQNLILQSAESYFNVLRSQDNLASTKAEEAAFKRQLD 169

Query: 172 QTRQRFEVGLTAITDVHEAQANYDSTVAQEIQAKNQLEFALEALRVITGKYHDRLFGLNT 231
           Q+ +RF+VGL+  TDV ++QA+YD+  A  I A+ Q++ A +AL  +T + ++ + G+  
Sbjct: 170 QSNERFDVGLSDKTDVLQSQASYDTARANRIVAQRQVDDAFQALITLTNRQYNSIQGI-V 228

Query: 232 ENFAATMPVPAAVDEWLETAQDKNLALLVDRLAMDIAKEDISIARSGHLPTLGLTANASR 291
                  P P     W++TA  +NL LL    A+  A++ +   ++GHLPTL   A   +
Sbjct: 229 HTLPILPPAPNDAKSWVDTAARQNLNLLASNYAVSSAEQTLKQRKAGHLPTLDAVAKYEK 288

Query: 292 SKDD---ISNPFLQFETPY---LDSQSVAVQLNVPIYQGSRVSSQTDQAKFNYVAASQAA 345
             +D    +NP   F  PY   ++  ++ +QLN+PIY G   SSQ  Q+      + Q  
Sbjct: 289 GDNDALGFANPN-SFGAPYGGNVEQSTLGLQLNIPIYSGGLTSSQVRQSYAQLDQSEQQR 347

Query: 346 EQTYRQTVQSIRSSFNNVKASISTIRALEQSVVSADSALKATEAGFDVGTRTIVDVLDST 405
           E   RQ V++ R+    V   +  ++A  QS++S  SA++ATE G+ VGTR IVDVLD+ 
Sbjct: 348 ESLRRQVVENTRNLHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQ 407

Query: 406 RNLFDARRNLAGARYDFIQSVVTLKQAAGTLTGEDVAMINRGLK 449
           R L+ + RN    RYD+I   + LKQAAGTL   D+  + R LK
Sbjct: 408 RQLYTSVRNYNNTRYDYILDNLRLKQAAGTLNPGDLEDLRRYLK 451