Pairwise Alignments

Query, 286 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 246 a.a., putative outer membrane protein from Escherichia coli BL21

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 15/231 (6%)

Query: 64  KITLGVGAAYAPK-YEGSDKLKVGAVPLISVAYGDFLNVDFSSATVNLLNQNGFRLGIKG 122
           ++++G GAAY    Y G ++    A+PLIS   GD   V  ++    L       L +  
Sbjct: 23  ELSIGAGAAYNESPYRGYNE-NTKAIPLISYE-GDSFYVRQTTLGFILSQSEKNELSLTA 80

Query: 123 GW---EGGRKEKDDRKNLHGLGDIKAGGVVGGVIAYSVEPF---EIYAKVDKTIGGSEGL 176
            W   E    + DD   +  L D +    + GV  Y  E +   +  A  D  +  S G 
Sbjct: 81  SWMPLEFDPADNDDYA-MQQL-DKRDSTAMAGVAWYHHERWGTVKASAAAD-VLDNSNGW 137

Query: 177 TATIGASVSHKIDQFILGADLSATWADDNHMKSYFGVTSAQSARSGLRRYDAK-AGFKRI 235
              +      +I +  L   L   + D+N    Y+G++ ++S RSGL  Y A+ A    +
Sbjct: 138 VGELSVFHKMQIGRLSLTPALGVLYYDENFSDYYYGISESESRRSGLASYSAQDAWVPYV 197

Query: 236 DATASISYMMTENWSVTGMGGAGFLIGDAKDSPLSKKDIQPFAMIGMSYTF 286
             TA   Y + E+  +    G   L  +  DSP+  ++     + G+S+ F
Sbjct: 198 SLTA--KYPIVEHVVLMASAGYSELPEEITDSPMIDRNESFTFVTGVSWRF 246