Pairwise Alignments

Query, 833 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  166 bits (421), Expect = 4e-45
 Identities = 122/401 (30%), Positives = 196/401 (48%), Gaps = 24/401 (5%)

Query: 442 HYIDVRRKQTECDILERRLEHAERLQAVGTLAGGIAHEFNNILGAILGYAEMAQNMLRRS 501
           H+ID     TE   LE +   ++++QA+G LAGG+AH+FNN+L A++G+ ++        
Sbjct: 400 HFIDA----TEQRNLEMQFAQSQKMQAMGQLAGGVAHDFNNLLTAMIGFCDLLLQRHGAG 455

Query: 502 SVTRRHIDQIISSGDRARLIIDQILTLSRKLERVTKPFSVSELVMEIAPLLRVALQRNIE 561
             +   I Q+  + +RA  ++ Q+L  SR+     +  +V++ + E++ LLR  L   IE
Sbjct: 456 DPSFADIMQVKQNANRAASLVRQLLAFSRRQALQPRLLNVTDALAELSNLLRRLLGETIE 515

Query: 562 LKFKFDDKKSVVEGSPLEVQQMLMNLCKNASQAFTADGQIDIIVSRIFVSRQKVLAHGVM 621
           L+        +V   P +  Q+++NL  NA  A    G + I  + + V +       +M
Sbjct: 516 LRMIHGRALGLVRVDPGQFDQVIINLAVNARDAMPGGGALTIRTNAVHVDQPIQRGPELM 575

Query: 622 PAGDYVLLSVSDDGEGIAETVLPHIFEPFFTTRSCSGGTGLGLAAVHGHVSALAGYIDVT 681
           PAGDYV + V+D G GI +  L  IFEPFF+T+    GTGLGL+ V+G V    G+I V 
Sbjct: 576 PAGDYVQIEVADTGTGIGKENLARIFEPFFSTKEVGAGTGLGLSTVYGIVRQTDGFIFVE 635

Query: 682 SAVGRGTRFDIYLP-------PSSKKPVSPDAFFGPCKTPRGNGEIVALIEPDPVLREVY 734
           S  G+G  F IYLP         +K+   P    G   T  G+G I+ L+E +  +R   
Sbjct: 636 SEPGQGATFSIYLPRIDADPAAETKRAPLPSEAAGADLT--GSGTIL-LVEDEDAVRLFG 692

Query: 735 EDKIAALGYEPVGFKTCADLCNWISKGKQADLVLVDQSSLPENQSATAL------HAAFK 788
              +   GY  +  ++       ++ G+    VL+    +P     T          A K
Sbjct: 693 ARALRNKGYTVIEARSGEQAMEVLNGGEPIQ-VLISDVVMPGMDGVTLARFVRMERPAIK 751

Query: 789 TASIIIGGSDLKMSLSSDDMTSAL-FLPKPISSRTMAYAIR 828
              I+I G    ++    D  + + FLPKP S R +A A++
Sbjct: 752 V--ILISGYSEDVARDGIDPDAGIHFLPKPFSLRQLAGAVK 790