Pairwise Alignments

Query, 307 a.a., transposase from Agrobacterium fabrum C58

Subject, 415 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score = 72.0 bits (175), Expect = 2e-17
 Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 8/233 (3%)

Query: 65  CG-YGLHRLLTKLGFDCAVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWTPDE 123
           CG + L RL    G +  ++SP  + R      K D RDAE +A       +  V    +
Sbjct: 127 CGAHYLGRLFAAHGHEIRLMSPEYV-RPYVKAQKNDDRDAEGIAEAASRPTMRFVELKTQ 185

Query: 124 EQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRY--NRPTYWTKIHWRWVNELRKFR 181
           EQ  ++ L R R + +   +    QL++ LL  G  +   R      I     +E     
Sbjct: 186 EQLDIQTLHRVRSRLVAERRSLTNQLRAILLERGTIFPVGRRKLELGIDALLADEDTTLS 245

Query: 182 FPHQQLAFEELKRTIRQIEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIAATLA 241
            P  +    EL+   R+++  + TL+    +  ++    A    L S+ GV  + A  L 
Sbjct: 246 -PRLRQLVAELRAEWRELDTRVETLNGEFVELARN---DAAARRLTSIPGVGVLNATALI 301

Query: 242 AEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEAS 294
           A +GD + F   R L AWLGLVP +H++G   R   I+K GN   RT+++  +
Sbjct: 302 AAVGDASSFAKARDLGAWLGLVPRQHTTGGKPRLLGISKRGNTYLRTLLIHGA 354