Pairwise Alignments

Query, 307 a.a., transposase from Agrobacterium fabrum C58

Subject, 392 a.a., transposase from Pseudomonas putida KT2440

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 9/247 (3%)

Query: 61  EAGPCGYGLHRLLTKLGFDCAVVSPAMIPRRAGDRIKTDRRDAEMLARLWRAGELTPVWT 120
           E GP      RLL   G    ++ PA          K DR D   + R  R   +  +  
Sbjct: 95  ECGPGAQAWARLLQAKGNPVRIL-PAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPI 153

Query: 121 PDEEQEAMRDLIRTRKQSLDALKIAKQQLQSFLLRHGLRYNRPTYWTKIHWRWVNELRKF 180
                 A++ L R R+ ++        Q++  LL HG+  + P     I+      L   
Sbjct: 154 KSTTALAIQALHRIRRGNIKRHTALGNQIRGLLLEHGV--SMPQGDAAINKHVPRALEDA 211

Query: 181 RFPHQQLAFEELKRTIRQ---IEECIATLDQAIKDAVKDWRFGALVDALRSLHGVNTIIA 237
             P   L  E L   +     + E I  L + ++   ++ +   +   L ++ GV  IIA
Sbjct: 212 SLPLPDLLRELLDELLMDWLSLGERITALSRRLEATAQEDK---VAQRLITIRGVGPIIA 268

Query: 238 ATLAAEIGDINRFDNPRQLMAWLGLVPSEHSSGSTVRRGRITKTGNALARTMMVEASCRI 297
             + A+  D +RF + R   A+ G+VP +HSSG+ +R G+++K G+   R++M++ +  +
Sbjct: 269 TAIVAKQTDPSRFASGRMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSV 328

Query: 298 DTHLEKD 304
            + L  D
Sbjct: 329 LSQLRPD 335