Pairwise Alignments

Query, 286 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 4e-50
 Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 5/264 (1%)

Query: 28  LIWIAVVVFVDITAQWLAPFDYLQQSPLARFAPP-----GAPGHLLGTDYLGRDVLSNIL 82
           L ++ +VVF  + A W+AP D  +Q       PP     G    +LGTD LGRD+LS ++
Sbjct: 42  LAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDLLSRLI 101

Query: 83  VATQTSLMIALVGSLICAFIGTTLGFLAAHFGGWVDNLIMGFADAKASVPFIIFALGVLA 142
              + SL+I L   ++    G  LG LA  F   +   IM   D   ++P ++ A+ ++A
Sbjct: 102 QGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLAVAIVA 161

Query: 143 FLGSSPLILLMLVGVASFERYARLTRGLVLSANQEGYAEAARIVGVPSLRIYVRHVLPNI 202
            LG   +  ++ + + S   Y RLTR  V+      Y  AAR+ G    R+    VLPN 
Sbjct: 162 ILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVTVLPNC 221

Query: 203 AGPLIVQITLNFPDIILLESGLSFLGLGIQPPETSLGLMVADGRNYIAIAWWLIALPGVV 262
             PLIVQ TL+F   IL  + L FLGLG+QPP    G M+A  R+YI  AWW+++LPG+ 
Sbjct: 222 MAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLT 281

Query: 263 IVLTTLSISLLGDYLRDRFDARLR 286
           I+L+ L+I+L+GD LRD  D +L+
Sbjct: 282 ILLSVLAINLMGDGLRDALDPKLK 305