Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein (agrocinopine) from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  193 bits (491), Expect = 4e-54
 Identities = 120/336 (35%), Positives = 166/336 (49%), Gaps = 30/336 (8%)

Query: 1   MISFILARLVRAIIVMMLTVTFVFIILRL-GGDPARAMLGENAT-PEALAAFRTAWGLDR 58
           M+SFI  RL   I          F ++RL  GDP   M+GE    PE  A      GL++
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNK 60

Query: 59  SIPEQFLIYLASALRGDFGVSAADGREVFTVISERIPKTLTLTISAFVLSILVGIPAGII 118
            +P Q+L Y+    +GD G S      V+       P TL L  +A + + +VG+ AG+I
Sbjct: 61  PLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVI 120

Query: 119 AAVRRDSAADKSVMAGAVLGYSVPNFLLGLTLIFVFAVWFRVLPSSG------------- 165
           AA++R S  D  VM  ++ GYS+P F  GL LI  F+V     P SG             
Sbjct: 121 AALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTG 180

Query: 166 ---------------SSTWQHAILPVATFGLVNAAAIARFARSALIEVLEQPYIAAARAD 210
                               H ILP    G +  A IAR  RS+++EVL + YI  ARA 
Sbjct: 181 FMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAK 240

Query: 211 GIPKWEVVIRHALPNAAIPMVTMLGFVAAGLLGGSAIVETVFAWPGLGSGFVRAITLSDL 270
           G+    VV  H L NA IP++T+ G     LL G+ + ET+F+WPG+G   + AI   D 
Sbjct: 241 GLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY 300

Query: 271 NVVQAMILLFTAFMVTINLIVDVLYAVLNPKIRLQK 306
            VVQ  ILL    ++ +N +VD+LY + NP+IR Q+
Sbjct: 301 PVVQNGILLIACLVILVNFVVDILYGLANPRIRHQR 336