Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score =  206 bits (525), Expect = 1e-57
 Identities = 116/314 (36%), Positives = 169/314 (53%), Gaps = 11/314 (3%)

Query: 38  IPDRVEPALALLKAKPPTGNEWSWELKWDGYRLAVHIEPQRIRILTRGGHDWTHRFPAIE 97
           +P++  P LA L  + P G +W +E+K+DGYR+   I+   +R+ TR GHDWT   P   
Sbjct: 202 LPEQFTPQLATLVDRAPEG-DWQYEIKFDGYRMLARIQAGEVRLFTRNGHDWTECLPRQV 260

Query: 98  QAARALGPATMIIDGEAVVLDDEGRPDFGLLQQSLGASGKQAGRRASHAVLYAFDLVYLD 157
           +A +AL      +DGE V L+ +G PDF  LQ +          R+   V Y FD  +L+
Sbjct: 261 KALQALKLKDSWLDGEVVSLNGDGLPDFQALQNAFDIG------RSLDIVYYLFDAPFLN 314

Query: 158 GHDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDAEPAVLLEHVCRLGLEGIVGKRL 217
           G D R      RR  L++ + G  + ++ +R SE   A    + E  C L LEG++GKRL
Sbjct: 315 GEDRRQAPVEERRAALKEALAG--SRSTLLRYSEAFTAHHRDIFESACDLALEGVIGKRL 372

Query: 218 DQPYRSGRTGDWVKVKCIQSEAFFIVGYERSASYPAGFGSLALAAYRDGDLVHVGSVGTG 277
             PY S R+ DW+K+KC  S+ F IVGY R     +GFG+L LA   D  LV+ G VGTG
Sbjct: 373 GSPYVSRRSADWIKLKCRLSQEFVIVGYTRPQGSRSGFGALLLAVNNDTGLVYAGRVGTG 432

Query: 278 FKGAEIIRLRKILDTLRWKRK--QPPLPHSGTADIVWVQPTLIAEIEFRAWTSDGKLRHP 335
           F  A +  +   L  L  +      PL  +    + WV+PTL+A+++F  WT +  +R  
Sbjct: 433 FDQAALKAIYAQLTPLECETSPLAKPLSSAQARGVHWVKPTLVAQVQFAEWTREDVVRQA 492

Query: 336 SYKGLRERQDNADV 349
           ++ GLR  +  A V
Sbjct: 493 AFVGLRTDKPVAQV 506