Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 833 a.a., DNA ligase D from Pseudomonas putida KT2440

 Score =  212 bits (540), Expect = 3e-59
 Identities = 123/325 (37%), Positives = 174/325 (53%), Gaps = 14/325 (4%)

Query: 22  PRRKRNPAQPQLLFDPIPDRVEPALALLKAKPPTGNEWSWELKWDGYRLAVHIEPQRIRI 81
           PR  R  A  ++   P+P +++P LA L   PP+G +W +E+K+DGYR+   IE Q IR+
Sbjct: 198 PRSSRKRAD-KVQAAPLPAQLQPQLATLVDSPPSG-DWRYEVKFDGYRILARIEGQDIRL 255

Query: 82  LTRGGHDWTHRFPAIEQAARALGPATMIIDGEAVVLDDEGRPDFGLLQQSLGASGKQAGR 141
            TR GHDW+ + P    A RALG  +  +DGE VV D+ G  DF  LQ +      +   
Sbjct: 256 FTRNGHDWSSKMPRQVAALRALGIDSAWLDGEMVVADENGMADFQALQNAFDTEHDE--- 312

Query: 142 RASHAVLYAFDLVYLDGHDLRGVEYRSRRHLLEDTINGPTNEASAIRISETLDAEPAVLL 201
                  Y FDL +L G DLR +  ++RR+ L   +    N    I+ S   D     LL
Sbjct: 313 ---RITYYLFDLPFLGGQDLRQLPLQNRRNTLRQLLE--HNHCDVIKYSADFDEPVQSLL 367

Query: 202 EHVCRLGLEGIVGKRLDQPYRSGRTGDWVKVKCIQSEAFFIVGYERSASYPAGFGSLALA 261
           +  CRL LEG++GKR+D  Y   R+ DW+K+KC Q + F IVGY       +GFG+L LA
Sbjct: 368 DSACRLKLEGLIGKRVDSVYSGRRSPDWIKLKCKQRQEFVIVGYTDPKGSRSGFGALLLA 427

Query: 262 AYRD--GDLVHVGSVGTGFKGAEIIRLRKILDTLRWKRKQPPLPHSG--TADIVWVQPTL 317
            + +  G L + G VGTGF    +  +   L  L   R   P P +G     + W++P L
Sbjct: 428 LHDNDSGQLRYAGKVGTGFNATTLASIHARLKPLEIARPALPSPPAGAEARGVHWLRPQL 487

Query: 318 IAEIEFRAWTSDGKLRHPSYKGLRE 342
           +AE+ F   T DG +RH  + GLR+
Sbjct: 488 LAEVAFAQMTRDGIVRHSVFHGLRD 512