Pairwise Alignments

Query, 353 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

Subject, 552 a.a., putative DNA ligase, ATP-dependent from Pseudomonas putida KT2440

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)

Query: 53  PPTGNEWSWELKWDGYRLAVHIEPQRIRILTRGGHDWTHRFPAIEQAARALGPATMIIDG 112
           PP+  +W  E KWDG R  V     ++ + +RG    T RFP +   A+ L P  +++DG
Sbjct: 231 PPS--DWQIEWKWDGIRAQVVKRDGQLWVWSRGEELVTERFPELHGLAQTL-PDGVVLDG 287

Query: 113 EAVVL------DDEGRPDFGLLQQSLGASGKQAGRRA---SHAVLYAFDLVYLDGHDLRG 163
           E +V        +     F LLQQ +G   K  G++    +  VL A+DL+   G D R 
Sbjct: 288 EILVWKPGETETELAVQPFALLQQRIGR--KTLGKKLLNDAPVVLQAYDLLEWQGEDWRS 345

Query: 164 VEYRSRRHLLEDTINGPTNEASAIRISETLD----AEPAVLLEHVCRLGLEGIVGKRLDQ 219
                RR  LE  ++   +  + + +S  L     A+ A   E    LG+EG++ K+ + 
Sbjct: 346 RPQHERRSQLEHLVD--EHPLAPVLLSPLLQGPDWADLARQREQSRSLGVEGLMLKQREA 403

Query: 220 PYRSGRTGD---WVKVK 233
            Y  GRT D   W K K
Sbjct: 404 LYGVGRTKDMGIWWKWK 420