Pairwise Alignments

Query, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 322 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  144 bits (363), Expect = 3e-39
 Identities = 93/298 (31%), Positives = 149/298 (50%), Gaps = 14/298 (4%)

Query: 14  ALSVAATV-ASAQDVLRVGDQRGNARAVMDASGVLKD----VPYQVEWSEFANAAPLLEA 68
           A+S  A V A A + LR+G Q+     ++ A G L+         V+W+EF     LLE 
Sbjct: 17  AVSFGAIVQAQAAETLRIGYQKYGTLVLLKAKGTLEKRLAAQGVNVQWTEFPGGPQLLEG 76

Query: 69  LAAEALDAGSVGDAPLTFAAARGVKAKAIFATKYE-----GNAIIVKNDAPYQGIKDLVR 123
           L   ++D G  G+ P  FA A G     +    YE       AI+V  D+P + + +L  
Sbjct: 77  LNVGSIDFGVTGETPPVFAQAAGAD---LLYVAYEPPAPTSEAILVPKDSPIKSVAELKG 133

Query: 124 KKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSVDAVSLWEPYISF 183
           KKV   KGS  H L++++L++AGLK   +  VFLPPA+A  A   GSVDA  +W+PY + 
Sbjct: 134 KKVVLNKGSNVHYLLVRALEDAGLKYTDVQAVFLPPADARAAFERGSVDAWVIWDPYQAA 193

Query: 184 ATLKSGARIIVDGKNY-PSLSYFIASEAAIEGKRDILKDFVARSAKARAWGLEHPQEYSK 242
           A  +  AR + DG     +  +++A++   +   +++K  V        W   +PQE ++
Sbjct: 194 AEKQLQARTLRDGTGIADNHQFYLATKPYAQQHPEVIKALVEEVRAVGEWSKANPQEVTE 253

Query: 243 IIAQLVKIPDDVALGKQTRERHAPQLINADVEKLQQSTIDLYYGAGIIDKKLKASDLL 300
            +A L+ +P D+ L    R+ +    +  +V   QQ   D +Y   +I K L   D++
Sbjct: 254 QVAPLLGLPADITLTSVKRQGYGALFLTPEVVAAQQKIADSFYQLKLIPKPLNIKDVI 311