Pairwise Alignments

Query, 310 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  127 bits (320), Expect = 3e-34
 Identities = 95/308 (30%), Positives = 150/308 (48%), Gaps = 11/308 (3%)

Query: 1   MKTKSIIRLALSL-ALSVAATVASAQDVLRVGDQRGNAR-AVMDASGVLKD----VPYQV 54
           M  K + +L L+L A ++  ++ASA+  LR+G Q+ +    ++ A G L+        +V
Sbjct: 1   MTFKPLRQLGLALLASALLPSLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGIRV 60

Query: 55  EWSEFANAAPLLEALAAEALD-AGSVGDAPLTFAAARGVKAK--AIFATKYEGNAIIVKN 111
            W EF +  PLLEAL    +D +  V D    F  A G K    A  A      AI+V  
Sbjct: 61  TWHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPA 120

Query: 112 DAPYQGIKDLVRKKVAFVKGSAGHALILQSLKEAGLKEDAITPVFLPPAEATLALTNGSV 171
           D+P + + DL  K+VA  K +  H L++Q+L +AGL    ITP +L PA+   A  N  V
Sbjct: 121 DSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKV 180

Query: 172 DAVSLWEPYISFATLKSGARIIVDGKNYPSLS-YFIASEAAIEGKRDILKDFVARSAKAR 230
           DA   W+PY++ A  +  ARI+VDG    S   Y++A     +   ++L+       +A 
Sbjct: 181 DAWVTWDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAG 240

Query: 231 AWGLEHPQEYSKIIAQLVKIPDDVALGK-QTRERHAPQLINADVEKLQQSTIDLYYGAGI 289
           AW   +P+  ++I+  L    D   + +   R  +  Q +  D    QQ   D +Y  G+
Sbjct: 241 AWTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADAFYREGL 300

Query: 290 IDKKLKAS 297
           + K +  S
Sbjct: 301 LPKAVDTS 308