Pairwise Alignments

Query, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  210 bits (534), Expect = 5e-59
 Identities = 131/329 (39%), Positives = 181/329 (55%), Gaps = 15/329 (4%)

Query: 16  LLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLPLL 75
           + R L   +PT F I  L F +++L PGD  + M  E      E  A      GL+ PL 
Sbjct: 5   IARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGER-RVDPEMHAQAMERLGLNKPLP 63

Query: 76  DQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIMAL 135
            Q  +Y   LA   LG S R    V    +   P TL L   A++ A +VG+ AG I AL
Sbjct: 64  VQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAAL 123

Query: 136 NATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGG----MKTIGASSGGF- 190
                 D  +   SL  YS+P FW GLI I+ FSV LGW P  G    +  I   +G   
Sbjct: 124 KRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFML 183

Query: 191 ---------GWLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLA 241
                    G   D V + +LPA  L    +A+ AR+TRSS+LEV+ +D++RTA+AKGL+
Sbjct: 184 IDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLS 243

Query: 242 PRQVVLRHVLRNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLL 301
           P +VV  H LRNALIP+ TV G+ V  +L GA++ ET+FSWPG+G+   +A+ AR+Y ++
Sbjct: 244 PARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVV 303

Query: 302 LGIMLVSSVLVICVNAIVDIIQAALDPRI 330
              +L+ + LVI VN +VDI+    +PRI
Sbjct: 304 QNGILLIACLVILVNFVVDILYGLANPRI 332