Pairwise Alignments

Query, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

Subject, 328 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  374 bits (959), Expect = e-108
 Identities = 185/326 (56%), Positives = 252/326 (77%)

Query: 6   MKRLTRVGRSLLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIR 65
           M++  R+ + L R ++ AVP    IV + FF+LQL PGDAAD +AAE+G+AT ET A IR
Sbjct: 1   MRKSERIRQVLWRTVLHAVPVAIGIVIVVFFLLQLVPGDAADVLAAEAGSATAETTAQIR 60

Query: 66  RAFGLDLPLLDQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLV 125
           R FGLDLP+  QL NY ++LAHFSLG SPRY  PV  LI+ RLP TL LM+ + ++A++V
Sbjct: 61  RQFGLDLPVWHQLYNYLSNLAHFSLGFSPRYNAPVTALILSRLPQTLLLMLASQLVAIVV 120

Query: 126 GIAAGTIMALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGA 185
           GIA G +MA+ A +  DR+LS+ +LL YS P FWIGL+ +I+FSV+L WLP GG  TIGA
Sbjct: 121 GIALGVVMAVWAGKWPDRLLSLLALLLYSTPGFWIGLMALILFSVRLEWLPGGGSATIGA 180

Query: 186 SSGGFGWLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPRQV 245
              G+ +L DR+ +A+LP  +L+ +++AIYARLTR+++LE+  QD VRTA AKGL+P +V
Sbjct: 181 DLHGWAYLGDRLQHAVLPVCALSSFFIAIYARLTRAAMLEIDRQDFVRTAHAKGLSPWRV 240

Query: 246 VLRHVLRNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIM 305
            LRH+LR AL+P+TTVAGIH+  +LGGA V+ETVFSWPG+GRLA +AVMAR++ +LLG++
Sbjct: 241 TLRHILRCALLPVTTVAGIHIGNLLGGAAVVETVFSWPGLGRLALEAVMARDFNVLLGVL 300

Query: 306 LVSSVLVICVNAIVDIIQAALDPRIE 331
           L+S+ LVI  N +VD++Q+ LDPRI+
Sbjct: 301 LLSAFLVIVANILVDVLQSWLDPRIK 326