Pairwise Alignments

Query, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  412 bits (1058), Expect = e-119
 Identities = 238/558 (42%), Positives = 338/558 (60%), Gaps = 45/558 (8%)

Query: 1   MAIPLLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLL- 59
           MA  LL VR+LSV +++ +G   AV N+S+ +  GE +A++GESG GKS ++ A+ NL+ 
Sbjct: 1   MADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLID 60

Query: 60  -PDEASSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLH 118
            P    SSGE+  +G DL ++     R + G  I MIFQ+P+S LNPVYTVG Q+ E L 
Sbjct: 61  MPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALR 120

Query: 119 AHERLSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIA 178
            H  +  + A+   L L   V++PEP + +  YPHE SGGQRQR MIA A+AL P LLIA
Sbjct: 121 THG-IDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIA 179

Query: 179 DEPTTALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELK 238
           DEPTTALD T+Q+++L L+  L+R+  MG+L+I+HDL +VS   DRVVVM  G  +E   
Sbjct: 180 DEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGT 239

Query: 239 AEHLFQESQHPYTKGLIGASIRLGDGRHASS--ERLNEIRTHRNSNGTTSFEIRSPPVAA 296
              +++  QHPYTK LI A+   G     S+  E + ++R  R S G   FE        
Sbjct: 240 VREVYRNPQHPYTKKLIAAAPGKGQLHEPSTDGEPILKVRNARKSYG--GFE-------- 289

Query: 297 EPRTNATADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKA 356
                                        A+  ++F+L  GET+ +VGESGSGKS+L++ 
Sbjct: 290 -----------------------------ALKGISFDLKAGETVAVVGESGSGKSTLARI 320

Query: 357 LSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVLH 416
           L RL     G   ++GQD+     ++L   R  +QM+FQDP  SLNPR TV  ++     
Sbjct: 321 LLRLDDPDSGTAHWKGQDLFTLSPSELFKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWV 380

Query: 417 AH-KYRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICD 475
            H +    A  ++R +E L++V L    + R+PH+FSGGQRQRIAIARAL + P L++CD
Sbjct: 381 IHPEILPKAKWRARAAELLERVGLSPEHMGRYPHQFSGGQRQRIAIARALALEPQLIVCD 440

Query: 476 EPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNH 535
           E VSALDVSVQAQ++ LL  L+ E G++++FI+HDL +V+  +D +MVM+ G ++E G  
Sbjct: 441 EAVSALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTV 500

Query: 536 QNLWSNPSHEYTRKLIAA 553
             ++ NP   YT+ LI+A
Sbjct: 501 AQVFDNPQQRYTQALISA 518



 Score =  214 bits (546), Expect = 5e-60
 Identities = 124/262 (47%), Positives = 173/262 (66%), Gaps = 15/262 (5%)

Query: 304 ADALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLIP- 362
           AD LLEV +L+V +  A+ T  AV  +++ + RGETL ++GESGSGKS  S A+  LI  
Sbjct: 2   ADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLIDM 61

Query: 363 ----VAGGQILFEGQDITHAGGADLRAFRGR-VQMIFQDPYSSLNPRRTVGDILDSVLHA 417
               ++ G+IL  G+D+      D RA  GR + MIFQDP S LNP  TVG  +   L  
Sbjct: 62  PPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALRT 121

Query: 418 HKYRNSADRQSRISEAL---DQVRLPR--SAVERFPHEFSGGQRQRIAIARALIVRPSLV 472
           H   N   RQ+++ EAL    +V LP    AV+++PHEFSGGQRQR+ IA AL ++P+L+
Sbjct: 122 HGIDN---RQAQV-EALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLL 177

Query: 473 ICDEPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIER 532
           I DEP +ALDV+VQA++L LL +L+ E G+  L I+HDL VV  ++DR++VM+ G ++E 
Sbjct: 178 IADEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVES 237

Query: 533 GNHQNLWSNPSHEYTRKLIAAA 554
           G  + ++ NP H YT+KLIAAA
Sbjct: 238 GTVREVYRNPQHPYTKKLIAAA 259



 Score =  171 bits (433), Expect = 7e-47
 Identities = 105/257 (40%), Positives = 150/257 (58%), Gaps = 11/257 (4%)

Query: 4   PLLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEA 63
           P+L VR+    Y    G   A++ +SFD+ AGE VA+VGESG GKST A  L  L   + 
Sbjct: 274 PILKVRNARKSY----GGFEALKGISFDLKAGETVAVVGESGSGKSTLARILLRL---DD 326

Query: 64  SSSGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHERL 123
             SG   + G DLF L P      L   + M+FQ+P  +LNP  TV   I+E    H  +
Sbjct: 327 PDSGTAHWKGQDLFTLSPSELFK-LRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEI 385

Query: 124 SRKAA-RSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPT 182
             KA  R+R  ELL+ V +   H  +  YPH+ SGGQRQR  IA+A+AL P L++ DE  
Sbjct: 386 LPKAKWRARAAELLERVGLSPEH--MGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAV 443

Query: 183 TALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHL 242
           +ALD ++Q+Q++ L+D+LRR++ +  + I+HDL LV  + D V+VM  G+ +E      +
Sbjct: 444 SALDVSVQAQVVRLLDKLRREMGIAFIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQV 503

Query: 243 FQESQHPYTKGLIGASI 259
           F   Q  YT+ LI A++
Sbjct: 504 FDNPQQRYTQALISATL 520