Pairwise Alignments

Query, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  137 bits (344), Expect = 1e-36
 Identities = 126/444 (28%), Positives = 204/444 (45%), Gaps = 42/444 (9%)

Query: 80  PHLAESWDISADGKTYTFHLRPGIKWH------DGQPFTSADVAFSLLTL-------KET 126
           P LA SWD+S DG TYTFHLR G+K+H        + F + DV F+   +       ++ 
Sbjct: 73  PGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVLFTFNRMINKDDPFRKA 132

Query: 127 HPRRRVTF------ASLEKIDTPDPLTVVAQFKTP----VPFLLPALSGIASPIIPKHLY 176
           +P     F       +++ I+  D  TV     T     +  L  + + I S      L 
Sbjct: 133 YPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLAMSFASIQSAEYAAQLL 192

Query: 177 EETDIRANPYNAKPIGTGPYVFKEWERGSHILLERNPDYWIKDLPLLDAVVTRFIVDVSA 236
           +E   +    N KPIGTGP+VFK +++ S+I    N DYW  +   +D ++     D S 
Sbjct: 193 KEG--KPADINQKPIGTGPFVFKSYQKDSNIRYTGNKDYWKPEDVKIDNLIFAITTDPSV 250

Query: 237 RGAAFEAGDVDVGYHTPVPLDEIKRLGDD-----PRFGVETRGYELEGSLNQLFFRLDHP 291
           R    +  +  +    P P D +K LGDD     P       GY     ++++       
Sbjct: 251 RIQKLKKNECQITLF-PRPAD-LKALGDDKDLKLPHQAGFNLGYIAYNVMDKVKGSDQPN 308

Query: 292 ILSDLRVRQAFAHAINIDDYIRLVWKGYAVPSPTAIAPSMAEYHDPSIGFYAFDKAKAEA 351
            L+DLRVRQA   ++N    I  V++G    +  A+ P+   Y D +I    +D  KA++
Sbjct: 309 PLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNAMPPTQWSY-DTTIKDAKYDPEKAKS 367

Query: 352 LLDEAGHKRGGDGKRFAL--RLTYNPVYGPTRVGAEFLRSAFGDIGVDVAIQSYDYATYI 409
           LL EAG K G +   +A+  +  YNP     ++ AE L++ +  IG++V I SY++  YI
Sbjct: 368 LLKEAGIKEGTEIVLWAMPVQRPYNP---NAKLMAEMLQNDWKKIGLNVKITSYEWGEYI 424

Query: 410 KSVYTDAAFDIDLQHLANGYDPTDGIQRGYWSKNIKKGVPWSNHSGYSNAEVDEIFEKGS 469
           K         + +    +  DP + +   +   ++      +N S + + + D I ++  
Sbjct: 425 KRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLS----GNNFSKWCDKKFDGIVKEAK 480

Query: 470 IEIDPAKRKEYFVRFQHILHRDLP 493
              D AKR E + + QHIL   +P
Sbjct: 481 ATSDVAKRTELYKQAQHILKDAVP 504