Pairwise Alignments

Query, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 2e-36
 Identities = 120/442 (27%), Positives = 199/442 (45%), Gaps = 38/442 (8%)

Query: 80  PHLAESWDISADGKTYTFHLRPGIKWH------DGQPFTSADVAFSL-LTLKETHPRRRV 132
           P LA  W++S DGKTYTFHLR G+K+H        +PF + DV F+    L + +P R+ 
Sbjct: 73  PGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPFRKA 132

Query: 133 ---------------TFASLEKIDTPDPLTVVAQFKTP-VPFLLPALSGIASPIIPKHLY 176
                            A +EK+D       + +     +  L  + + I S      L 
Sbjct: 133 YPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYADQLL 192

Query: 177 EETDIRANPYNAKPIGTGPYVFKEWERGSHILLERNPDYWIKDLPLLDAVVTRFIVDVSA 236
           +    +A   N KPIGTGP+VF ++++ + I  + N DYW  +   +D ++     D S 
Sbjct: 193 KNG--KAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITTDASV 250

Query: 237 RGAAFEAGDVDVG-YHTPVPLDEIK--RLGDDPRFGVETRGYELEGSLNQLFFRLDHPIL 293
           R    +  +  V  +  P  ++ +K  +    P+      GY     ++++    +   +
Sbjct: 251 RMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIAYNVMDKIKGSNEANPM 310

Query: 294 SDLRVRQAFAHAINIDDYIRLVWKGYAVPSPTAIAPSMAEYHDPSIGFYAFDKAKAEALL 353
           + L+VRQA   A++    I  V++G    +  A+ P+   Y D SI   AFD  KA+ LL
Sbjct: 311 AQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSY-DDSIKDAAFDPEKAKQLL 369

Query: 354 DEAGHKRGGDGKRFAL--RLTYNPVYGPTRVGAEFLRSAFGDIGVDVAIQSYDYATYIKS 411
            EAG K G +   +A+  +  YNP     ++ AE L+S +  IG+   I SY++  YIK 
Sbjct: 370 KEAGIKEGTEITLWAMPVQRPYNP---NAKLMAEMLQSDWAKIGIKAKIVSYEWGEYIKR 426

Query: 412 VYTDAAFDIDLQHLANGYDPTDGIQRGYWSKNIKKGVPWSNHSGYSNAEVDEIFEKGSIE 471
                   + +    +  DP + +   Y        V  +N S +     D++ ++    
Sbjct: 427 SKGGEQGAMLIGWSGDNGDPDNWLGTLYGC----DAVDGNNFSKWCYKPYDDLIKQAKAT 482

Query: 472 IDPAKRKEYFVRFQHILHRDLP 493
            D AKR E + + QHIL   +P
Sbjct: 483 SDQAKRTELYQKAQHILKEQVP 504