Pairwise Alignments

Query, 528 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

Subject, 507 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  278 bits (711), Expect = 3e-79
 Identities = 173/524 (33%), Positives = 290/524 (55%), Gaps = 27/524 (5%)

Query: 4   SILSVESLTHSFGPSPALRDINLAIRSGEVVGIVGENGAGKSTLLNVLSGTLKPSRGTVA 63
           ++L ++ ++  FG S AL  ++  + +GE+  + GENGAGKSTL+N++ G  +P  G  +
Sbjct: 6   ALLELKGISKRFGASRALTGVDFTLHAGEIHALCGENGAGKSTLMNIIDGIHQPDEGETS 65

Query: 64  IGGTPVALENYYEANQRGIWRIFQDPALIGALPVYESLFLGHEKRFTRFGVLNKAKMIDI 123
           + G  V ++    A + GI  + Q+ AL G   V E++F+  E    +   +N A + + 
Sbjct: 66  LDGRKVVIDGPAHAMRLGIGLVHQEIALCGDATVAENIFMP-EINAGKHAWMNYASLNER 124

Query: 124 ARDLVRSMGIAVDVKHLMLNYDFATRQSLEVCRAILLP-KVLGLPSGFVLFDEPTTGLSR 182
           A  +++ +G  VD   L+ +   +T+Q +E+ +A+ L  KVL       + DEPT  L+ 
Sbjct: 125 AARVLQRLGQDVDPAALVKDLSISTQQLIEIAKALTLDCKVL-------ILDEPTAALTD 177

Query: 183 AEVVRLLESMGRLRRQGAGVAFVSHRLQEVFDVCDRLIVLKDGAIVGEGPISQFDEAGLH 242
            E   L + +  L+ QG G+ ++SHR+ E+F  C R+ VL+DG  V  GP+++ D   L 
Sbjct: 178 NESAALFKVLHDLKAQGIGIIYISHRMAEIFAHCSRVTVLRDGRNVHCGPLAELDADALV 237

Query: 243 RLMVGRAFESTTPGKRS-TLNEEPFLVVKGLSRSSRPSAGQRLTHLTDISFNVGKGEIVG 301
           R MVGR   +  P K     + EP L V  ++   R         +  +SF + +GEI+G
Sbjct: 238 RRMVGRDLGNYYPPKHGDAAHGEPVLEVSDIADGER---------VHGVSFTLRRGEILG 288

Query: 302 IGGLLGSGKGQLLRVLAGVTSHRDGTVELGGMPLA-GSIAQRKQKGIAFIPGDRSNEAVV 360
           I GL+G+G+ +L   + G+ +   G V L G  LA    +   ++GIA++  DR    V 
Sbjct: 289 IAGLMGAGRSELAETVCGLRTATRGAVRLRGRTLAIRKYSDALREGIAYLSEDRKAAGVY 348

Query: 361 VTADVASNISLPSGHAGARGFSNAFGIWRSAREQNVARQMIVSLRIKAVSGQ-PLRTLSG 419
           +   +A NI+        R  S+ FG+ + A E+ +A  +   L++K+      + +LSG
Sbjct: 349 LDLPIAQNIA----SMALRRVSSRFGLLQRAAERKLALDLGGKLKLKSDGVDIDVASLSG 404

Query: 420 GNQQKVSLARWIHREPVLLLIENPTAGVDVGAKREIYALLRDLTAHGTSILYVTDDLPEL 479
           GNQQKV++A+ +   P +LL++ PT GVDVGAK EI+ +LR+L + G  ++ ++ +LPE+
Sbjct: 405 GNQQKVAIAKLLATNPSVLLMDEPTRGVDVGAKSEIHHILRELASQGVGVVVISSELPEI 464

Query: 480 ISLSDRILIMRDGRIVSDIDNRQTLTTEHALVADMIGPASNEKT 523
           I L DR L++RDGR+  ++ + +   TE AL+    G    E T
Sbjct: 465 IGLCDRALVIRDGRLAGEVQDNE--MTEEALLRLASGLCEEEAT 506